Thalassiosira pseudonana: THAPSDRAFT_5185
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Entry
THAPSDRAFT_5185 CDS
T01078
Name
(RefSeq) predicted protein
KO
K12175
COP9 signalosome complex subunit 1
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tps04121
]
THAPSDRAFT_5185
Ubiquitin system [BR:
tps04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
THAPSDRAFT_5185
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN7
PCI
Motif
Other DBs
NCBI-GeneID:
7449716
NCBI-ProteinID:
XP_002290144
JGI:
5185
UniProt:
B8C273
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All DBs
Position
5:564071..565965
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AA seq
558 aa
AA seq
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MASLPAFDLQTYISRYDPPSETRLQRLLFLAHQFHSSSNNSEHGSDSLASQQAFDMAVQR
MKESGNHRRYLEEFGAVEATSPSVEDHHPELNSANISSSGSPHRSRSDSHSSSHHHANHS
HPSSQPIHAYQTYDPSFPAQSKLTSQSRLETLDARLGTAMSHVNKESIRMALLALGEFHR
GRGDLREAWRKADFVSRHLLTNEYRLHLISTSISDYCVNGHQHWNVCLLMVELSVDLREW
SNVRDTIARAEHTVMGEIDDPLFHHKLRAANALANLAEGKYLESARLFTSVSIDLTNQFN
SVISAEDLAMYGSLLGLATMDRGALHASVIDGPFKGRLELVPAMKEALRHYSLAEYGQCI
SILQNTIQRDLLLDIHLHAHVPSLLDMIRDRCIVQYFQPYSSVSLEKMGKVFGYNVMDIE
AVVAKLISNGGVGGTTLGEGARINALDKTLSVESQSTVERKARRRARVRAAKMGLHFVRN
AEGIISRVGCLENGIMIGSGFKSARASTRARNRDVAGQQETSDRIVPEPFSDDDESVSDG
DDMEMDNDEANPNDDFDL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcttcccgcctttgacctccaaacctacatctcccgctacgatccaccctcc
gaaacacgccttcaacgtcttctcttcctcgcccatcaattccactcatccagcaacaac
agcgagcatggttccgattcccttgcctctcaacaagccttcgacatggccgtacaacga
atgaaggaatcgggaaatcatcgtcgttaccttgaagagtttggggccgtggaggctact
tctccatctgtcgaagatcatcatccagagctaaactcggcaaatatcagcagcagcggt
agccctcaccgctctcgatccgactctcactcctcctctcaccaccatgccaatcactcc
cacccctcctcccagccaatacacgcctatcaaacctacgatccttccttccccgcccaa
tcgaaattgacgtcacaatcacggttggaaacattggatgcacggttgggtacggcgatg
agtcatgtgaataaggagagtattcggatggcgttgttggctttgggggagtttcatagg
gggaggggtgatttgagagaggcttggaggaaggctgatttcgtatcaaggcatttactg
accaatgaatatcgtttgcatttgatatccacatccatcagtgactactgcgtgaatggc
catcagcattggaatgtttgtctcctcatggttgagttgagtgtggatttgagagaatgg
tccaacgtacgtgacaccattgcccgagctgaacacaccgtcatgggagaaatcgatgat
cctctctttcaccacaaactgcgtgctgcaaacgctctagccaacctagccgagggaaag
tacctcgaatctgccaggttgttcacttccgtctctatcgatttaaccaatcagttcaat
tcagtgattagcgccgaggatttggcaatgtacggttcgttgttgggattagccaccatg
gacaggggagctttgcatgcctcggtgattgatggccctttcaaggggagactggagctt
gtgcctgccatgaaggaagctcttcgtcactattcgcttgcggagtacggccagtgcatt
tccatccttcagaatacaatccagcgtgatttgcttcttgatattcatcttcatgctcat
gtgccttctcttttggatatgattcgtgatcgatgcattgttcagtacttccaaccctac
tcgtcggttagcttggagaagatgggaaaggtgtttgggtacaatgttatggatattgaa
gcagtggttgcaaagttgattagcaatggaggagttggaggcacaaccttgggagaggga
gcacgtatcaatgcattggacaaaacgctgagtgtggaaagtcagagtaccgtggaacga
aaggctaggaggagggcacgcgtacgagctgccaagatgggacttcactttgttagaaat
gccgaggggataatatctcgtgttggatgtttggagaatgggattatgatcggcagtggt
ttcaagagtgcgagggcttctactcgtgctagaaacagagatgttgctgggcagcaggag
acatcggatcgtatcgttcctgaaccgttttcggatgacgatgaaagtgtcagcgacggg
gatgacatggagatggataatgatgaggccaaccccaatgatgattttgatctctaa
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