Thalassiosira pseudonana: THAPSDRAFT_5585
Help
Entry
THAPSDRAFT_5585 CDS
T01078
Name
(RefSeq) predicted protein
KO
K14137
protein prenyltransferase alpha subunit repeat containing protein 1
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tps01006
]
THAPSDRAFT_5585
Prenyltransferases [BR:
tps01006
]
Protein prenylation
Rab geranylgeranyltransferase
THAPSDRAFT_5585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPTA
UPF0270
Motif
Other DBs
NCBI-GeneID:
7448163
NCBI-ProteinID:
XP_002290781
JGI:
5585
UniProt:
B8C3B5
LinkDB
All DBs
Position
5:complement(<1572151..>1573639)
Genome browser
AA seq
409 aa
AA seq
DB search
MMMQPAPPKSVALLLDYLHQEPVPVEVNIAVLWDPDEETGVAGADVLNCYPVRSYVKVDS
HLGINAPDLPRLAREFRDEFYLVRGRYRDVNGCESSTNLQVDGALAPRVLDATTCLLFVC
PDDATAWADRRRALLDGCGGDILMISLQKELTFINLLFTQHAKAKWVAKKLVDLAAQRDK
EYNNIYQWASSEINTCSSVAERFPKNYHAWTHRRWVFRLQFKTWISKSDSTVTAEDCIET
KLIFKLLYKELENTQIWMKTHVSDHSACHYQGQVLRMLLAVGLHPTNGYFASSNDEDGIT
WAWDLLTKTINSARASSFFSHEVTWIHRRISSFTIINLFDGCIAADNTVPLVRFDSNTLA
SVLDEFVKMEVHDLASTYFDSDRSSTEAAHAMSKVELLQDDARDKYSGK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgcaaccggctcctccgaaaagtgtagcactgctacttgactatctacaccaa
gagccagttcctgttgaagtcaacattgccgtgttatgggatcctgacgaagagaccgga
gttgctggtgctgatgtactcaactgctaccccgttcgatcgtatgtcaaggtagactct
catttgggaataaacgcaccagatcttcctcgcttggcacgtgagtttcgagacgagttc
tatttagtacgtgggcgatatcgggatgtcaacggttgtgaaagcagcaccaacctccaa
gtcgacggtgcattggcaccaagggtactagatgcgacgacatgtctcctttttgtctgt
ccagacgatgcaacggcttgggcagatcgacgaagagccttgcttgacgggtgcggtggg
gacatcttaatgatatctttgcaaaaggagttgacatttatcaacttgcttttcactcag
catgcaaaagcgaagtgggttgctaaaaagctggttgatcttgctgctcaacgtgacaaa
gaatacaacaatatatatcagtgggcatcgtctgagatcaatacgtgctcttcggttgct
gaacgattcccaaagaactaccacgcgtggactcatcgtcgatgggtgtttcgattacag
ttcaagacatggattagcaaatctgattcaacagtgactgctgaagactgcattgaaaca
aagctgatatttaaacttctttacaaagagcttgaaaatactcaaatatggatgaagact
catgtcagtgaccactcagcctgtcactaccaagggcaggtgctgcgaatgcttctagct
gttggtctgcacccaacaaatggatactttgctagtagcaatgatgaagacggaatcacg
tgggcgtgggacttgttgacgaaaacaataaacagtgcaagagcatcgtcgtttttttct
cacgaagtcacgtggatacatcgcagaataagcagctttacgattatcaatctatttgat
ggatgcattgctgctgataacacagtgcccttggttcgttttgactcaaatactcttgcc
agtgttttggacgaatttgttaaaatggaagtgcatgacttggcatcgacgtattttgat
agcgatcgatcttcaacagaagcagcacatgcaatgtccaaggtggaactgctccaagac
gatgcaagagacaaatacagtggcaaataa
DBGET
integrated database retrieval system
