Thalassiosira pseudonana: THAPSDRAFT_5686
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Entry
THAPSDRAFT_5686 CDS
T01078
Name
(RefSeq) predicted protein
KO
K12898
heterogeneous nuclear ribonucleoprotein F/H
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tps03041
]
THAPSDRAFT_5686
Spliceosome [BR:
tps03041
]
Complex C
Other components
hnRNP proteins
THAPSDRAFT_5686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
7444860
NCBI-ProteinID:
XP_002290834
JGI:
5686
UniProt:
B8C3L7
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Position
5:complement(1824104..1825593)
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AA seq
387 aa
AA seq
DB search
MEDVPAPLLPTQGAESPEHIEHQQHQESLHQQGMQQQGFVGFGMDPNWGGFGQMMHGQGY
HGMQAGGLDGNQLIPGLAPSMDPLEALLGPFPCVRVRGLPFEATLEDVLVFFQGLVVIDV
VLVPHAESGEAFVVFANPMDFQMGLQRDHQSMGRRYLEVFQGKRSDYYAAIASQNHHWQG
GEGLLNNTGSIEEQLGEHGVGSLPGGEDSSDALTGASLKSGNGDGAAWGNSSSAQSNSHH
HGRGSMGRGGMGRGGYNNGGSYRGRGYGGPGRGYRGNNYRSGPGPTGGGTREGTHTGYVR
LRGLPFQASKQDILDFFQEYNPIESSVLLTYRGDGRSTGEGYVAFKDADDAKEAMALHRS
TIGSRYIELFISNKEEHARNVARSNPR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgtaccagcaccgcttctccctacacagggagctgaatcgcctgaacacatc
gagcatcagcagcaccaggagtctttgcaccagcaggggatgcaacagcagggcttcgtt
ggatttggaatggaccctaactggggcgggttcgggcagatgatgcacggccagggatac
cacggtatgcaagccggagggcttgatgggaaccaactcatccctggcctcgcaccatcc
atggatcctttggaagctctactaggtcccttcccctgtgttcgtgtccgtggtctacca
tttgaggctacgttggaggacgtactcgtgtttttccaggggctggtggtgattgacgtg
gtattggtacctcatgccgaatcaggggaggcatttgtggtatttgcaaatcctatggat
ttccaaatggggcttcagagggatcaccaaagcatggggcgtcgttaccttgaagtcttt
caagggaagcgatctgattactatgcagctattgcatcgcaaaaccatcactggcaggga
ggtgaagggctattgaacaacactggctctatcgaggaacagttgggagaacacggggtt
gggtctttgccggggggagaagattcttctgatgctcttacgggggcatctttgaagtcg
ggcaatggagacggggctgcttggggaaactcttcgtcggctcaatcgaactctcaccat
cacggaaggggctcgatgggacgaggaggtatgggacgaggagggtacaacaatgggggt
tcttatcgtggtagaggatatgggggtccggggaggggatacaggggcaacaactacagg
agtggccctggtcccactggaggaggcactcgcgagggaactcacactggatacgtccgc
ttgaggggattgccattccaggcttccaaacaagacattcttgacttctttcaggagtac
aatccgattgagtcgagtgtcttgctcacatacaggggcgacgggcgctctaccggggag
ggatacgtggcttttaaggatgccgatgatgcgaaggaggccatggcattgcacaggagc
accattggctctcgttacattgaactctttatcagcaacaaggaggaacatgcaaggaat
gtagcacgatccaatcctcgttaa
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