Thalassiosira pseudonana: THAPSDRAFT_6045
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Entry
THAPSDRAFT_6045 CDS
T01078
Name
(RefSeq) predicted protein
KO
K06171
nicastrin
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
7448579
NCBI-ProteinID:
XP_002290995
JGI:
6045
UniProt:
B8C5E5
LinkDB
All DBs
Position
6:563976..566387
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AA seq
803 aa
AA seq
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MVGRILHWSSVVENANNDDDAAENNGNRRLANPEMAPYVTILNESEYTSNTIAQLVLYSS
SYVASDAYGSVEVGGPLRGILVLADGDGSSSSDGNVNNGNNNSNGYTSPESPTPQGDNTP
MSSLSIGSSYEWNVNGNGLTMTDMYGIPTVYVYDAATAEYLREVGTEQSASLQSSSNSNN
EDDTTNAVYPSILSEFNYYMGPQVTESGETVTSKECLEWKNVDGTWSPKCLPLGGNSVWS
VAGSPVSLDYSGGEGNNNSKNKPVVMLSTNIDTTSAFHDISPGANTAASNILTLLLSAQL
VGSITDEVLDQLPGKIAFGFFQGESYGYLGSRRFLEDVVQGFNCQNGNEGVASVYKRKDE
KGIARACLHPLRADLTFQNINNLRGMIAVDQVGNLGGGKTLYVHGGEKSATNAQDGFAGF
LAEVMVELSTDDYSVQASSVGEQDGVNPLPPTPLTSLVQVSEGALGGIVLTGYDNAFVDN
SLYHSHLDSVSKLQMIDSDAIASAATVLARSAVAAAYQNENEEVDAATAAAYALELLPNA
ASSSSDTFQSLYNCLFQDGNCETLLTYGNVERNNDAKRTGIDLGLGQPLKTPPNYYVSIY
DGDNGQAFVRASEVIYGSLVAEESGENANIKPYGQDAGDVFLLRPSLLEMSIAGLLNAFL
GRGSFAPGDDGNTASPNLLKCESTADCSSVSYCSTSSSSLAVPTCAGGMCVCGSRSHYHP
ALDEAIAPATNKRTSYFTVQDDDGGISALYTEPFWSSSVGVRVYNDAGNTPGVWASSIGS
VFAVICLTFVFRLKTKLIKEKVY
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggtggggaggattttgcactggagtagtgttgtcgagaatgccaacaacgacgacgat
gcagctgagaacaacggcaacagacgcctagccaatccagaaatggcgccctacgtaacc
atccttaatgaatcagaatacacgtctaatacaattgcacaacttgtactctattcatct
tcatacgtggcgagtgatgcgtacggaagtgtcgaggttggtggaccgttgagagggatt
ttggtgcttgcggatggtgacgggagttcaagtagcgatggcaatgtaaacaacggaaac
aacaactcaaacggatacacttcaccagagtctccaactcctcagggagacaacactccc
atgtcctccctttccattggatcttcttacgaatggaacgtgaacggtaatggactcacc
atgacggacatgtatggaattcccactgtatatgtctatgatgctgctactgcagagtat
ttgagggaagttggtacagagcagagtgcctcgcttcagtcgtcttccaacagcaacaat
gaggatgacactactaatgcagtgtatccatccatcctctcggaattcaactattatatg
ggtccacaagttactgaaagtggtgaaacggtcacttcaaaagaatgtctcgagtggaag
aatgtagatggaacgtggagtccaaagtgtttgccattgggtggaaatagtgtttggagt
gttgcggggagtccggttagtttggactacagtggtggagagggcaacaacaacagcaaa
aacaaaccagtcgttatgctcagtaccaacattgacaccacatcagccttccacgacatc
tctccaggggcaaacactgcagcctccaacattctaacccttctcctctcagcacaactt
gttggatccatcacggacgaagtattggatcaacttcccgggaagattgcgtttggattc
tttcaaggtgaatcctatgggtatttggggtcacgtcgttttctcgaggatgtcgtgcaa
ggattcaactgtcagaatggaaatgagggggtggcatcggtgtacaaacgtaaagacgag
aagggaattgccagagcgtgtttgcatccactacgagctgacttgacgtttcagaatatc
aacaatctacgtggaatgattgcagtggatcaagtgggaaatcttggcggaggcaagact
ttgtacgtgcacggtggagagaaatcggctacaaatgctcaagatgggttcgcgggcttt
ctggcagaagtgatggtagagctgtcgacagatgattattcggtacaagcatcgtcggta
ggtgaacaagacggagtaaatcctcttcctcctacaccattgacttcactcgttcaagta
tcggaaggtgcccttggtggaattgttctcactggatatgacaatgcctttgtagacaat
tcattgtatcattcacatttggattccgtgtcgaagctccagatgattgattcagatgcc
attgcatcggcagcgaccgttttggcgaggtccgccgtggcagcagcgtatcagaatgag
aatgaggaggtagatgctgccactgcagctgcctacgctttggaattgcttcccaatgca
gcctcctcttcctcggatacctttcagtcactctacaattgtctctttcaagatggcaac
tgcgaaacccttttgacgtatggcaacgtggaacgaaacaacgatgccaagcgaacagga
atagatttgggtcttgggcaaccactcaagactcctccgaactactatgtgagcatttac
gacggagacaatggacaagccttcgtcagagcgagtgaagtaatctatggatcattggtg
gcagaggaaagtggcgagaatgccaacattaaaccgtatggacaggatgcaggtgacgtc
tttctcctacgtccatcgttgcttgaaatgtcaattgctggtctactgaatgcatttctg
ggacgaggttcctttgctcctggtgacgatggcaatactgcatctcctaatttgttgaaa
tgcgagagtaccgccgattgctcgtctgtatcgtattgcagtacttcttcttcctcgttg
gcagtgcccacatgcgcaggaggaatgtgtgtttgcggttctcggtctcattaccaccct
gctctcgatgaagcaatcgctcccgcaacaaacaaacgaactagctactttacagttcaa
gacgacgatggaggaatcagtgcattgtacacagaaccattttggtcatcttctgtggga
gtacgtgtgtacaatgatgctggtaatacacctggagtttgggcttcaagtattggatct
gtgtttgcggtcatttgcttgaccttcgtctttcgattgaagacgaagttaatcaaggag
aaggtgtattga
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