Thalassiosira pseudonana: THAPSDRAFT_6056
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Entry
THAPSDRAFT_6056 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03754
translation initiation factor eIF-2B subunit beta
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tps03012
]
THAPSDRAFT_6056
Translation factors [BR:
tps03012
]
Eukaryotic type
Initiation factors
eIF-2B
THAPSDRAFT_6056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF-2B
NAD_binding_8
Mannitol_dh
Phage_ASH
MCM4_WHD
Motif
Other DBs
NCBI-GeneID:
7448585
NCBI-ProteinID:
XP_002291000
JGI:
6056
UniProt:
B8C5F6
LinkDB
All DBs
Position
6:597353..598975
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AA seq
481 aa
AA seq
DB search
MTADVASARASSPTSTPPANNTLDDPANVRRWLQSNHPKQLALLDNFEIELRLGRFSNAS
SRDGPGGGNTSGAGAQGGTYQYGKERRLVTSRTVELLRAIIGSTRWRNAAQVLTLLRGLG
NELHAAGGYREPAIGNVVRRVMYAVRDEADRVSVPSSMGNSDMDKIDELTEEVSSKLRVA
PAGKELSLASMLWAHPQHVTMKHSRQQSGDFSDRLRSDSMGSDSGLMTSASKDGSDGAMA
IYPPHFYTRRDDLRQSVMEAIQEMMSELEDLHKNINEQATQHIHAGEIILTYALSKTVEL
FLKAAAAKKRKFSVIVCEGAPHFGGHAMAKSLAEAGIDTTVIHDAATFAIMARVNKVLLP
AHAVLANGGLIAPSGSNMVALAAKQNSVPVVTVAGMFKLCPMYPHEGQDTLNDLISPSSV
VDGSLMSDPVLSEVEFVNPVHDYIPPQLIDLYVTNIGGFQPSYIYRLLAEYYHSDDWEAF
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgacgtagcctcggcaagagcctccagcccaacatccacaccaccagccaac
aacaccctcgacgaccccgcaaacgtccgccgatggctccaatccaatcacccaaagcaa
ctggccctcctcgacaacttcgagattgaactccgtctcggccgattctccaacgcctcc
tctcgcgatggacccggtggcggcaacaccagcggtgcaggtgcacaaggaggcacatac
caatacggaaaggaacgacgactcgtcacatctcgcacagtggagttgctacgtgccatc
atcggatcgacgcgatggaggaacgccgcacaagtgttgacactgctgcgtggactgggg
aacgaactgcacgccgcgggtggatatcgtgagccggcgattgggaatgtggtgcgaaga
gtcatgtatgcggtgagagatgaggcggaccgtgtatcggtgccctcttcgatgggtaat
tcggatatggacaagattgatgagttgacggaggaggtgtcgtcgaagttacgtgttgcg
ccagcggggaaggagttgtcattggcgtctatgctttgggctcatcctcagcatgtgact
atgaaacattctcggcagcaatcgggtgattttagtgatcggttgcgttctgactcaatg
gggtcggactctggattgatgacttccgcgtctaaagacgggagtgatggagcaatggcg
atctatcctccccacttttatacacgacgagatgatttgcgtcagagtgttatggaagct
atccaggagatgatgagtgagttggaagatttgcacaagaatatcaacgaacaggctacg
caacacattcatgctggggaaatcatattaacgtatgccttgtcaaagactgtggaattg
ttcctgaaagcagcagctgcaaagaaaagaaagttttcagtgatagtatgcgagggagca
ccgcattttggagggcatgctatggcaaagtctttggctgaggcaggaatcgataccact
gtcattcatgatgctgcaacgtttgcaattatggcgagagtaaacaaagtgttgttgcct
gcccatgcagtactcgccaatggaggattgattgcgcccagtggttcaaacatggtggcg
ctggcggccaaacaaaactcagtacctgtggtgactgtagcaggaatgttcaagttgtgt
ccaatgtatccgcacgaggggcaggataccctcaatgacctcattagtccttcgtcggta
gttgatggcagtctcatgagtgatcctgtcttgtccgaggtagagtttgttaacccggtg
cacgattatatccctcctcagctgattgatttgtatgtgacaaatattggaggttttcag
ccgagttacatctatcgtctgcttgcggagtattatcacagtgatgactgggaggcattt
gagtaa
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