Thalassiosira pseudonana: THAPSDRAFT_6167
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Entry
THAPSDRAFT_6167 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03349
anaphase-promoting complex subunit 2
Organism
tps
Thalassiosira pseudonana
Pathway
tps04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
THAPSDRAFT_6167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tps04121
]
THAPSDRAFT_6167
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_6167
Ubiquitin system [BR:
tps04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
APC/C
Cullin
THAPSDRAFT_6167
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
THAPSDRAFT_6167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
ANAPC2
Motif
Other DBs
NCBI-GeneID:
7443626
NCBI-ProteinID:
XP_002291443
JGI:
6167
UniProt:
B8C5R7
LinkDB
All DBs
Position
6:complement(878885..881176)
Genome browser
AA seq
763 aa
AA seq
DB search
MSTTAAPPAPPPAYQHLYHRRLSRAIQRANATQNRPTTKLAREFFKDVHQFDLRDATGWR
SLPRRVATLASYLNDPTSVICDTEESFSIRVSHDVHETRRVALTAAIFANSPPTFLNEFY
YLFEALLVARQRQWKKSNPLDESMETDDGDDDDDDDGGEEELMLLQEEEELYQSLSILGW
LPDQLRRPFREALHSVMMNVVKSLISGDFESEGMLERTLQWKTDVLIPWVHSVVGSEAYN
RDQWDAQLEYAASECFVRVRMNELFDLVTDYPDSLPAVRELSVALDRTGRLFYHSLANEW
RGALVKRLIHPGAQTSQIIDVYINTIKVLREMDPSGELLQVVTQPVREYLRGRADTVRCI
ITSLTDEEGGGDLYEELRRQDAKPLDEAQLDEEDDEEPPTFDWVPPPSILQRRGVITGQV
GRVTSSSRRAGDILSMLVGIYGSKELFVNEYRIMLADKLLSNLEYDTDKDVHNLELLKLR
FGEASMRQCEVMIKDIDDSKRIHNNIRSTLEAIALSSNPPVVDAAIVSHIFWPALQKEPL
KNHPRIQAELDQFSKEYAKLKNPRRLVWMKQLGTVELEVEFYDGDEDSIFTSHVKYITCT
PAHATLLAHFEDKPQWTADELSGETEMPEEIVRKRMSFWASHRVVQVRRSGSDFVYTLSS
LADVNELSFADHDDDDHEHAVSLGAHEKEEIKVFESYIVGMLSNLGQLPLERIHTMLKSF
TTGSDHNYNRTPQQLAVFLQQLCKEEKLECSPDGLYKLLKKRS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccacagcagcaccaccagcacccccaccggcctaccagcacctctaccaccgt
cgtctttcacgagccatccaacgagccaacgcaacacaaaatcgcccaacgacaaaatta
gctcgagagtttttcaaagatgtgcaccagtttgatctgcgtgatgcaactgggtggaga
agtctaccccgacgtgttgcaacattagcatcctatctcaacgatccaacctccgtcatc
tgtgatactgaggaatcattctcgatacgagtatctcatgacgtccacgaaacccggcgt
gtggctttgactgcagccatatttgccaattcaccgcctacgttcctcaatgagttttat
tatctatttgaggcgttgttggttgctcggcaacggcagtggaagaagagcaacccgttg
gatgagagtatggagacagatgacggagacgatgatgatgatgatgatgggggagaggag
gagttgatgttattgcaggaggaagaagagttataccaatcgttatcaatactgggatgg
ctacctgatcaactacgcagaccattccgcgaagcactccactcagtcatgatgaatgta
gtcaagtctctcatctctggtgactttgaatccgagggaatgctggaacgcacccttcaa
tggaaaacagacgtactcatcccatgggtacacagcgtagtaggatcagaagcctacaat
cgtgatcaatgggatgctcaattggaatatgcagcgtcggaatgcttcgtccgcgtgaga
atgaacgaactctttgatctagtgacggactatccggattctctcccggcggtacgagaa
ttgagtgtggcactggatagaacgggacggttgttctatcattcattggcgaatgaatgg
cgtggagcgttggtgaagaggttgattcatccaggtgcccaaacatcgcagattattgat
gtgtatatcaatacgatcaaggtattgagggagatggatccttctggggagttgttgcag
gtcgttactcagccggtccgtgagtatctgaggggaagggcggataccgtgcgatgcatc
attacaagtttgacggatgaagagggaggaggagatttgtatgaggaattacgaagacag
gatgccaagccattggacgaagctcagttggatgaagaggacgacgaggagccacctacg
tttgattgggtgccaccgccgtcaattcttcaaaggaggggtgttattactgggcaggtt
gggagagttacgtcgagctcacgtcgtgctggtgatatcttatcgatgctggtggggatt
tacgggagtaaagagctttttgtgaacgagtatcgtatcatgttggccgacaagctactg
tccaatctagagtatgatactgacaaggatgtgcacaacttggagttgctcaagctgagg
tttggagaagcaagtatgagacagtgtgaagttatgatcaaagatattgacgactccaaa
cgaattcacaacaatattcgatccactctggaagccatagctttatcatctaatcctccc
gtcgtcgatgctgccattgtttcacacatcttctggccagcattgcaaaaggaaccactc
aagaatcatccaaggattcaagccgaacttgatcagttcagcaaggaatatgccaagttg
aagaatccacgccggttggtgtggatgaagcaacttggaacagtcgagttggaagtggag
ttctatgatggcgacgaagatagcattttcacatcacacgttaaatatatcacctgcaca
cctgctcacgcgacactattggctcatttcgaggacaaaccgcaatggactgcagacgag
ctttcgggagagacggagatgcctgaggaaatcgtacgcaaacgaatgtcgttttgggca
agtcaccgtgtggtgcaagtgcgacgctctggatcagattttgtttacactttgagttca
ttagcagatgtgaatgaactaagctttgcagatcacgatgatgacgatcatgagcatgcg
gtatctctgggagctcacgaaaaagaggaaatcaaagtttttgaatcatacattgtgggt
atgctttctaacttgggacaattgcctctggagaggattcatacaatgctgaagtcattc
actactggatcagatcacaattacaataggacaccacagcaactcgccgtgtttttgcag
caattgtgtaaggaagagaagttagagtgtagtcctgacggcttgtacaagttgttgaag
aaaaggagctaa
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