Thalassiosira pseudonana: THAPSDRAFT_6511
Help
Entry
THAPSDRAFT_6511 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M48
Motif
Other DBs
NCBI-GeneID:
7446328
NCBI-ProteinID:
XP_002291624
JGI:
6511
UniProt:
B8C4I8
LinkDB
All DBs
Position
6:complement(1762787..1766970)
Genome browser
AA seq
1241 aa
AA seq
DB search
MQLLNLALLIAVHPCVNALLEIDRAGTVAEKEFIDADLQRDNAEAEAIFAPGLGSANIAA
EVEAELGLAAGSTQVDSRSGNVASILLSEPILPGTGVGNRFLWGGRTDGDGVSSSSSPHG
DAILQSHEHWEETAIEAVKSWIGQHADELNVDVSEMFAPGTTRVAVHGDGDLIQLHIPHF
FKGLEVVGSRAHATIKGGNLVAVGFEEWATIPSDFNVTPNLRRTKAYKTLANYVGRPMIR
GETTCKAELQILTLSSQMTTYGNGYSHVLAWKVCPTFEGQNQEMMEGYVDANIGKVYSFK
DTVDYFQAKGGVYPNSNDGVGEDGVEQAGWPMPFMEVGNEITDTGGNYFESGSQTASFTG
PFLEIQDGCDGFRVGSLTRTSGVDFGTSGGTDCSTPNVKGNTHSSRGGWYEVNKIAEIAR
SHLPSNKWLTKKLVAEVNINASCNAYWNGAIHFYRSSKNCGNTGEIQAIWAHEWGHGLDR
NDNTGSIAGPSGEGIAGAYCVERTPNLSVHHMTDTDIYAALHLNDSCIGRNFLIGRTCGG
FGDPCNECSGGEPNVPSWKLSSMLSALACAAVSHTSLTYPINPVVRDVDYVKRRSRKPHG
LSFAKNNCNGMVHCLGGVYSEAIWSLYKRTLRDEYGYDENTALEVTTRLTYIAAGNVQRW
FTEKDGGCESGSGYMQYLIADDDDGDLNNGTPHMKAIYKAFSDQEIACDSPSVKDSGCVG
TPDTAPAVTVTRGNTEATLSWNAVSGASNYQVFRTEGVHQCSQGKVLLTTTTDRSFTDKG
LQNGREYYYIVIAKGPNESCFGPASECMDVIPTLQLDPTTSPTQLPSSTPSTSIPPSVSL
TPTNYPISDPCGDGVCEASIGEDQHTCDLDCIVQEFETSVNYDKNTKSLMMTVNVAEDMT
FVSLDIIGKKSGGSLVEIYTRLGDYDNNEENPNAWELIFEDTVDLTQEQATTIGEFSVFT
PAGSDRAFHVYAKNGLMYEQGNAAVKSNGTLSLKKGVSLKDRFKQVKDTGIMSGSISFYT
MNAQTGPTPPTPTGTPPPPPPPPPTTPTVVTPSPSKQPTKQPVVTPSPSKQPSKQPVASP
PGETEVQFDTGADFSKNSEGHIFTLLAERDVTITSFDIIGKKDGGSDVLIYYRAGSYKGY
EEDSEGWTLLFDKKIDLLKEEPLNVGDLLENVSIAKDSEASFYIFSKKGLFWEETNDEGD
FWKSDGSIKIYTGVAMNKNMWEFDKGYGVWAGVIRYTAWGN
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttctcaacttggctcttctcatcgcggtgcacccttgtgttaatgcactcctc
gagattgatcgagcaggcaccgttgctgaaaaggagttcatcgatgccgatctacaaaga
gacaacgctgaagctgaagcaatctttgcaccaggtctcggatcagccaacattgcagcg
gaggtggaagcagagcttggattggctgctggcagtacacaagtggactctcggtctggc
aatgtagcttccatcttgttgtcagagccaatcctaccgggaactggagttgggaatcga
ttcctttggggaggaagaacggacggagatggagttagcagtagcagtagtcctcatgga
gatgcaatccttcaaagccacgaacattgggaagaaactgcaatcgaagccgtcaaatct
tggattggacaacatgcagatgaactcaacgtcgatgtatctgagatgtttgctcccgga
acaacgagggtagcagtccacggagacggtgacttgatccaactacacattcctcacttc
ttcaagggattggaggttgttggatctcgtgcgcatgccactatcaagggaggcaatctc
gttgctgttggctttgaagagtgggctacgattccgtcggacttcaacgtcactccaaat
cttcgtagaacgaaagcatacaagactcttgccaattatgttgggaggccgatgatccgt
ggtgagactacttgtaaggcagagcttcagatcttgacattgtcttctcaaatgacgacg
tatggaaatggatactctcatgttttggcatggaaggtatgtccgacatttgaaggtcag
aatcaagagatgatggagggttacgtcgatgccaacataggcaaggtgtactcgttcaag
gatacagtagattactttcaggccaagggaggggtttaccctaatagcaatgatggcgta
ggagaagacggagttgaacaagctggttggccaatgccgttcatggaagttggaaatgaa
atcactgatactggcgggaactacttcgagagtggaagccagacagcgagctttaccgga
ccatttctcgagatccaagatgggtgcgacggcttccgagtaggaagcctgacaagaacc
agtggtgtcgactttgggactagcggtggcacggactgcagcacgcctaatgtgaagggc
aatacgcactcctctagggggggatggtacgaagtaaataaaattgctgagatagcgagg
agccatctgcctagcaacaaatggttaacgaagaagctagtggcagaagtgaacatcaat
gcctcgtgtaatgcctattggaatggagccattcacttttatagatcgagtaaaaactgt
ggcaatacaggtgaaatacaggcgatatgggctcacgaatgggggcatggtttagatagg
aacgacaacaccggttccattgctggcccgtcgggcgagggtattgctggtgcgtattgt
gtagagcgcactcctaacctttccgtgcatcatatgacggacacagatatctatgctgct
ctgcacctaaatgatagttgtatcggtcgtaactttttaattggaagaacgtgtggaggt
tttggtgatccatgcaatgagtgctcgggaggtgagcctaacgttccctcgtggaaactt
tcttctatgctgagtgctcttgcatgtgctgcagtgtctcacacctcccttacgtatcca
attaatcctgtagttagagacgtggattacgtgaaacgtagatctagaaagccacatggt
ttatcgtttgcaaagaataattgtaatgggatggttcattgtcttggtggtgtttactcc
gaagcaatctggagtctctacaagcgtactcttcgcgacgaatacggatacgacgagaat
actgcgttggaggttacaacaaggctgacctacatcgcagccgggaacgttcaacgttgg
ttcacagagaaagatggaggatgcgagagtggtagtggatacatgcagtatttgatagcg
gacgatgacgatggagatttgaataacggtaccccacatatgaaagctatctacaaggca
ttcagcgaccaagagattgcatgcgattctccctcggtgaaggactctggctgtgttggt
actccagacactgctcccgctgttactgttacaagaggtaataccgaagccactctgtcg
tggaatgcggtgtcgggtgcatcaaactatcaggtattcaggacagagggagtgcatcag
tgtagtcagggtaaggtgctattgacgactaccacagatcgctcgttcactgataaagga
cttcagaacgggcgggagtactactacatcgtcattgccaagggaccaaatgaatcatgt
tttggaccagcttctgaatgcatggatgtcattcctactttacaactcgatccaacgact
tctcctacacaacttccatcgtcgacaccatccacttctattccaccaagtgtgtcatta
acgcccacaaactatcccatctctgatccttgtggtgatggcgtttgtgaagcaagcatt
ggcgaagatcaacacacgtgtgatttggattgtatcgtacaggaatttgagacctctgtt
aattacgataaaaacaccaagtctttgatgatgactgtaaacgtcgcggaggatatgacg
ttcgtatctttggatatcattggtaagaagtctggtggctctctcgtcgagatctacact
cgtctcggtgactatgacaacaacgaagagaatccaaatgcatgggagctcatctttgaa
gatacggtagatttgactcaagaacaagcgacaaccattggcgaattcagcgtctttact
cctgccgggtcggaccgtgccttccacgtctatgctaagaatgggttgatgtacgaacaa
gggaatgcagcagtgaaatccaacggtacgctttcattgaagaagggggtgagcctgaaa
gataggtttaagcaagtgaaggacactggcatcatgagtggatcaatcagcttttatacg
atgaatgctcaaactggaccgacgccaccaactccaacaggaacaccaccaccaccacca
ccaccaccaccaacgacaccaactgttgtaacaccgtctccatctaaacagcccacgaaa
caacctgtagtaacaccgtccccatctaagcagccttcaaaacaacctgttgctagtcct
cctggagagactgaggtacagtttgacaccggtgctgactttagtaagaacagcgaaggg
catatcttcactcttttagctgagagagatgtcaccatcacttccttcgatattattggt
aagaaagatggcggaagcgacgtattgatttactatcgtgctggaagctacaagggttat
gaagaagattcagaaggatggactctcctctttgataagaagattgatcttttgaaagaa
gaaccactcaacgttggagatcttctcgagaacgtatcaatagcgaaagattccgaagct
tcattttacatctttagcaagaaaggattgttttgggaagagaccaatgacgagggcgat
ttttggaagtcagatggatcaattaagatctatactggagttgcaatgaacaagaacatg
tgggagttcgacaaaggatacggtgtttgggcgggtgttatcagatacactgcctggggt
aattga
DBGET
integrated database retrieval system