Thalassiosira pseudonana: THAPSDRAFT_661
Help
Entry
THAPSDRAFT_661 CDS
T01078
Name
(RefSeq) mg chelatase
KO
K03404
magnesium chelatase subunit D [EC:
6.6.1.1
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00860
Porphyrin metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
THAPSDRAFT_661
Enzymes [BR:
tps01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.1 magnesium chelatase
THAPSDRAFT_661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mg_chelatase
VWA_2
AAA_lid_2
MCM
AAA_5
Sigma54_activat
VWA
AAA_16
AAA_3
VWA_CoxE
AAA_lid_8
AAA_32
AAA_2
Motif
Other DBs
NCBI-GeneID:
7445876
NCBI-ProteinID:
XP_002292830
JGI:
661
UniProt:
B8C9C8
LinkDB
All DBs
Position
10:complement(473286..475656)
Genome browser
AA seq
689 aa
AA seq
DB search
MIIDQQEIKHALLLSAVNPQSVGVLISGGRGTAKSVLARSMQQIVPSHIHRIKGNEYNVD
PKGRHGIDSFLLEQINENDDMSLESLQTELVPTPFVQIPLGVLEDSLIGTVDLEQSLETG
EAKFSPGLLAKAHRGILYVDEINLLDDEVADILIKVLSDGYVNVEREGLSVKYPCRPLMI
ATFNPQEGEMREHLLDRFAIALSADAIPLSIQERVMVVDNVINFSGGLQEQASVEAEKRL
RQAEVDEQNLRTQVELARLQLPKVNITRAQIQYLCEEATRGGCEGQRAEVFATEIAKASA
ALDGRDDVNSKDLQAAVILAILPRTLSKETPPPPSEGEPIPDSDSDTDKETKEETQDEIS
TEDSEDKEVQEDQPLAIPEEFMFGVKSVHIDSALLKFSRWTRKGRGGKRAKIFSLLRGRF
VKAIFPKGKKARLAVGATLRAAAPFQKARRERAVGTKYEGRKVIIRKEDFRIKRMSRKAG
TLVIFLVDASGSMALNRMNAAKGAAISLLSEAYKSRDKISLIAFHGEQAEVLVPPTRSIA
LTKHRLEAMPCGGGSPLAHGLTLAVRTGLNTMKVKQDVGRVCIVCITDGRANIPLELSLD
NKFTPSTDPDSTEGMPSRKFLKDEVLACSRKLSSLADFDFVCIDTEDVFVRTGIAKEMAQ
VAQGKYHHLDSADSAAVTQITQQKLREVN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgattattgatcagcaagagatcaaacacgcacttcttctatcggcagtgaatcctcaa
tctgttggagttctcatatccggtggaaggggtactgccaaatccgttttggctcgatct
atgcagcagattgtaccttctcatatacatcgtattaaagggaacgagtacaatgttgat
ccgaaaggaaggcatggtattgattcatttctactagaacaaataaatgaaaacgatgac
atgtctttggagtctctgcagacggaactcgttccgactcctttcgttcagataccactt
ggtgtactcgaagatagcttgataggaacggtggatcttgagcaaagcttggagacagga
gaagcaaagttctcaccgggtctgttggcaaaagctcatcgaggcattctctacgtcgat
gagatcaatctcctcgacgacgaagttgcagatattttgattaaagtattatccgatgga
tatgtgaacgttgagcgtgagggactcagcgtaaagtatccctgtcgtccactcatgatt
gcaactttcaatccgcaagaaggagagatgcgtgagcacttactagatagatttgcgata
gcactgtcggcagacgcaatacctctttcaatacaagaacgtgtgatggtagttgataat
gtgattaacttctcaggagggttgcaggagcaggctagcgttgaggcagagaaacgattg
cgacaggcggaagtagacgaacagaacctgcgaactcaagtagaattggcacgtcttcag
ctgccaaaggtcaacataactcgtgctcaaatacaatacttatgtgaggaagccaccaga
ggaggatgcgaaggtcaaagagctgaagtatttgcaacagaaatagcaaaagcctctgcc
gccctggatggaagagacgatgtgaactcgaaagatttacaggctgctgtgatactcgcg
attcttcctagaacattatcgaaggagactccgcctcctccgagcgagggagagccaatt
cctgattctgactctgatactgacaaagagacgaaggaggagacacaagatgaaatctca
acagaagatagcgaagataaagaagtccaggaagatcaaccgttagcgataccagaggag
tttatgtttggtgtcaagagcgtacacatcgactcagcgttgctcaagttctcgcgttgg
actcggaagggaagaggtggtaagcgagcaaagatattctcattgttgaggggtagattc
gtcaaggcaatttttccgaaaggcaaaaaggcaaggctggctgttggagccacccttcgt
gctgcggcaccgtttcaaaaggcacgacgtgagcgtgctgtcggtaccaagtatgaagga
cgcaaagttattattcgcaaagaagattttcgtatcaaacgcatgtcacgaaaagccgga
acgctcgtcatatttctcgttgatgctagtggatcaatggctcttaatcgcatgaacgcc
gcaaagggggcagcaatcagcttgcttagtgaagcgtacaaaagtagagacaagatcagt
ttgattgccttccacggagaacaggccgaagtgttggtgccaccgacacgaagtattgct
cttaccaaacaccgattagaggcaatgccatgtggaggagggagccctcttgctcacgga
ctaacattggctgttcgtactggacttaacacgatgaaagtgaagcaggacgttggtcga
gtttgcatcgtatgcataacagatggcagagccaatataccactggaattgtcattggat
aacaagttcactccgagtaccgatccagattcaaccgaaggtatgccaagtcggaagttt
ctgaaagatgaagtgttggcttgctcgcgaaagctttcttctctcgccgactttgatttt
gtttgcattgataccgaggatgtattcgtgcgaacaggaatagcaaaagaaatggcgcaa
gttgctcagggaaagtaccatcacctagatagcgcagactcggcagcagtgactcagata
actcagcagaagcttcgcgaagtcaattga
DBGET
integrated database retrieval system
