Thalassiosira pseudonana: THAPSDRAFT_7830
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Entry
THAPSDRAFT_7830 CDS
T01078
Name
(RefSeq) predicted protein
KO
K04615
gamma-aminobutyric acid type B receptor
Organism
tps
Thalassiosira pseudonana
Pathway
tps04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
THAPSDRAFT_7830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tps04030
]
THAPSDRAFT_7830
G protein-coupled receptors [BR:
tps04030
]
Metabotropic glutamate receptor family
GABA
THAPSDRAFT_7830
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_3
MCP-like_PDC_1
GPR158_179_EC
dCache_1
Motif
Other DBs
NCBI-GeneID:
7444971
NCBI-ProteinID:
XP_002291918
JGI:
7830
UniProt:
B8C7M7
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All DBs
Position
8:1248673..1250717
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AA seq
627 aa
AA seq
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MLNATQACAFSFSTNQGKNYGMTAFILHSRVAEVVADMIGRVFYNDDAANLIGGFGGNST
ATDAILTTTPSPWSITPQSLRDMVIANILQEEQEQQQSSASSYSQYPIYGSAIAFEPGVW
NVVEGLPRGVTYPASSAECREDTTYCTEDIIVNGNGVDSIRIGELNRNEDGMSIYCPYAY
RGPPDEIAYRNCSRDEPEYCPSMDLSFAYDYSNVTVPEAEWYTAPRCLYLRDGIATGYWS
SPYFDAGAGGINMVTYSQPIISRDGRFLGVATIDVEVEALCYGDQCNTPINYHYLDQIRP
VGFTFVAVAMAVAIGCGFWTHWFRTDRVVKASQPFFLILICAGCFVMSSAIIPLSIDDSL
ANVEGCLYNTIIYFVKACMAFPWLLSIGFTMTFSALFSKIWRLNRVFENAAAFRRVKVKE
RDVIMPFVVLMASNFTLLLLWTLLDPLKWHRTEPDQNYNSQGYCQADGDLWIVFFALIGS
INFLALMLANIQAFFARKITTEFSESSYVMMTMVSLLQALIIGAPLLILVRENEVVVYFV
WSVLIFVVVMATLSLMFGPKMMLVRQRALDRAAGIDPSRKNTRYSSGVRNSSNQGNEMEL
HSHENDQVIIEAVASGDGDITIVSGTF
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacgcaacccaagcatgcgccttctccttctccaccaaccagggcaaaaactac
ggaatgactgccttcattctacactctcgtgttgcggaggtcgtggccgatatgattggt
cgtgtattctacaatgatgatgctgccaatttgattggaggatttggtggtaacagtact
gccaccgatgctatattgacaacaacgccgtctccttggagcatcactccgcaaagtcta
cgtgacatggtcatcgccaacatccttcaagaagaacaggaacaacaacaatcatcggca
tcatcatactcacaatatccaatctacggatcagcaattgcgtttgaaccaggtgtctgg
aacgtagtggaaggtctaccacggggagtaacatatcctgcatcctcggcggaatgtcga
gaggatacaacgtattgcaccgaggatattattgtcaatggtaatggtgttgactcgata
cggattggggaattgaatagaaatgaggatggaatgtcgatctattgtccgtatgcgtat
cgagggcctccggatgagattgcctataggaattgttcacgtgatgagccggagtattgt
ccgagtatggatctgagttttgcgtatgactatagcaacgtcactgttcctgaggctgaa
tggtatactgccccgcgatgtctatatctacgagatggcattgcaacaggctattggagt
tcaccctactttgacgcaggagcagggggaatcaacatggtgacctactcacaaccaatc
attagcagagatgggaggtttttgggcgtagcaaccattgatgtcgaagtggaggcactg
tgctatggtgatcagtgcaatactcccatcaactatcattacttggatcaaattagacca
gtaggctttacgtttgtcgcagttgcaatggcagttgcgatcgggtgtgggttttggact
cattggtttaggacagatcgagttgtcaaggcatcgcagccgttctttctgatattgatt
tgtgcgggatgtttcgtcatgtcgagtgccatcattccactgtcgattgatgatagtctt
gcgaatgtggagggatgtctctacaatacaatcatttatttcgtaaaggcatgcatggcg
tttccgtggttgctatccatcggcttcactatgacgttctcggcactcttcagtaagata
tggagactcaaccgtgtattcgaaaacgctgcagcctttcgtcgggtgaaagtgaaagaa
agagacgttatcatgccattcgtcgttctcatggcgtccaactttacattgcttctcttg
tggactcttctcgaccctttaaagtggcatcgtactgaaccagatcagaattacaattca
caggggtattgtcaagccgatggggatttgtggatcgtcttctttgctctaattggatca
atcaacttcttggctctcatgctcgccaatattcaagctttctttgcacgaaagataaca
actgagttctcggagagttcatatgtcatgatgacgatggtatcgttgcttcaggctctc
atcattggtgctccgttgttgattctagttcgagaaaatgaagtggtcgtatacttcgtt
tggtcggtgttgatcttcgtagttgtgatggctactctctcgctcatgtttggtccgaag
atgatgttggtgagacaaagagcattggatcgggcagccgggatcgatccttccagaaag
aacacacggtattcatcgggcgtgcgaaactcgtcaaatcaaggcaatgagatggaactg
cattctcatgagaacgatcaggtaattattgaagcagtagcttcaggagacggtgatatc
accattgtctctggaacgttttga
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