Thalassiosira pseudonana: THAPSDRAFT_8433
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Entry
THAPSDRAFT_8433 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03145
transcription elongation factor S-II
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tps03021
]
THAPSDRAFT_8433
Transcription machinery [BR:
tps03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
THAPSDRAFT_8433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
zf-DNL
Motif
Other DBs
NCBI-GeneID:
7445900
NCBI-ProteinID:
XP_002292847
JGI:
8433
UniProt:
B8C9G9
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Position
10:complement(578916..580384)
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AA seq
394 aa
AA seq
DB search
MMEKKTNARLVTIAVDVSVEGGATTGDAVDYAVFGEEPSWPVMPVMSATFFDIVIRVVRA
PEEGGSGSPHRPSTSTPIMSSVKAVRQLKEDLLKLQARPDGDGNSEKILDILQRLDKEKI
DLAILTETLIGASVSKLKAHSDTNISISARGLVKKWKNIAKGKPADASKSTASTNNTSST
ITDVSPSPNKLKRLDSAGSSDINPETEWQGLPQLRINICKKLHTIFRMSQSDLSKELNES
AVKQLCLSRAGEVEAAVDTWSRGVKQTYNEKVRTLVFNLKKNGPLRDRVILGQVTPERLV
KMTSEELQTDEKAKAIEDTVKSLQESRRLDWDQANEDKINDMCGIKGDLKNASLFTCGRC
KSTKTTSTQKQTRSADEPMTVFVLCLNCGKRWKC
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaaaaagacgaacgcccgtctcgtgacgatcgcggtagatgtcagtgtcgaa
ggaggagctacgacgggtgatgccgtggactatgcagtcttcggagaggagccatcttgg
ccggtgatgcctgttatgagtgctactttctttgacattgtcattcgggtggttcgggca
ccggaggagggaggaagtgggagtccacaccgtccgtccacatccacaccgattatgtca
tcagtcaaggcagtgcgtcaactcaaagaggacctcctcaagctccaagcccgccccgat
ggtgacggcaacagcgaaaagatcttggacatcctccaacgcctcgacaaggagaaaatc
gatcttgccatcttgacagagacgctcataggcgcaagcgtctccaagttgaaggctcac
tccgataccaacatctccatctcggcaagaggtctggttaagaaatggaagaatattgcc
aagggcaaacctgccgatgcgtccaaatcaacagcaagcacgaacaacaccagtagcaca
attaccgatgtgtccccatctcccaacaaactcaaacgtctcgacagtgcaggatcctcc
gatatcaaccccgaaactgagtggcaaggccttccccaacttcgcatcaacatctgcaag
aagttgcacacaatattccgcatgtcacaatccgatttatccaaagaattgaacgaatcg
gcagtcaaacaactctgtctctctcgtgcaggcgaagtggaagcagccgtggacacttgg
agcaggggggtgaaacaaacatacaatgaaaaagtacgcacattggtcttcaacttgaaa
aagaatggtcctcttcgagacagagtcattctcggtcaagtaactcccgaacgtctcgta
aagatgacttccgaagaactgcaaaccgacgagaaggccaaagctatcgaagacacggtg
aagagcctccaggaatcgcgacgattggattgggatcaagccaacgaggataaaatcaat
gatatgtgtgggattaagggtgatttgaagaatgcaagtttgttcacgtgtgggaggtgt
aagagtacaaagactacgagtacacagaagcagacgaggagtgccgatgagcccatgact
gtgtttgtgctttgtttgaattgtggaaagagatggaagtgttga
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