Thalassiosira pseudonana: THAPSDRAFT_8536
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Entry
THAPSDRAFT_8536 CDS
T01078
Name
(RefSeq) predicted protein
KO
K02213
cell division control protein 6
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tps03032
]
THAPSDRAFT_8536
DNA replication proteins [BR:
tps03032
]
Eukaryotic type
DNA Replication Initiation Factors
pre-RC (pre-replication complex)
THAPSDRAFT_8536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_22
AAA_19
NB-ARC
NACHT
AAA_16
NPHP3_N
SLFN-g3_helicase
iSTAND
TniB
AAA_28
ATPase_2
KAP_NTPase
RNA_helicase
Cdc6_lid
Motif
Other DBs
NCBI-GeneID:
7450750
NCBI-ProteinID:
XP_002292899
JGI:
8536
UniProt:
B8C9S5
LinkDB
All DBs
Position
10:complement(834774..840915)
Genome browser
AA seq
1912 aa
AA seq
DB search
MSSNSETSVLDQHLAYSDFCEPPPSAAPAATTPTAPPSPSHAPSPPSHEPSSGDVSANHL
WPALKFDSLKQLMDNLTAALTPRVQTSTMSIMKAKVTLAMNTLMRECGVNFTADASRGCG
VAYLLGRETVRRSLVLLLYTKRGEEVVYDQGVVHDFFGNFEEMSSAIGYCGQEEFVHAYA
LAMGRMESVVQEEGEGLGQQLASLNNSARKSVMQSAQKSGAGVVVQPAQKKEGKKSVYSV
EEVGENALEKMMNSAEKEEKQQPPVETIEMNGCDVTSPMRGDDSLDSDSSMEVDASEMTW
VEMYDQLKTSGWCYKHGVGLIDWVWVHPSHANTPVSELLKNYEEGEDYVTSENELKLYAM
RRLGWKGDDYGEDNKGVSRSKRSRQKNEALPARRAVNSPLLEKNNPISTPAPAESALSSW
PDMWDMMKTDGWIYKKGPALIDWIWIHPSKADMKMNDLMKQGTVGVDYVTSEEDLMRYAK
TYYGWRGIVESPESSKEAEMADRIKKRKRRESSAKAEAAAPVTEPTRKNVGKGKSRMSIS
SGGKQLIQMNRAALRNSPATSATSDVSDASRFSDGAPSEQSVSCRTRSSVAGSPTVSEME
FGFGSTPSAKKRTAPKRLSYGKAGRNRSGRKKTEEEEESAESTSGYSETSASGASTSSGS
SGSAESSVDATYQIMANKDAWLALMKLFGFTFASGKYYCLPGKENKPGSESKAVEGVHYF
SSLEELRKNLCAYGLPTSKKALLDEERVDIERWVRYAHVANLPDGGIINPAHAGEPINHM
QAWGMLQKLGFKHSSGGYKVQNPDITKNPLKFERQQDFYVHLARFGIPRVDGASELSQAD
RLTLDLFICNPGVENVNTFKRINPYCNEITPRRPRSRGASQSTEAAFGGVFVSQGIVQKN
ATRNRKYHVAFNALKSQRNFPSNLLSNEDAMDMLIANYGFDEKAGKGDYTYFCLPNVVPN
EQVFLGVEYFESIQDLRVNLCAYGLPPQGSNASLTDEEQEDLEFWIRTAHLKLSPDDEKP
AVVHMKPRQAKATLDKLGYQISKEFDRYCLPNADFHNPAFGIGGFTTLLDFFNHIARFGL
VAAKDTDDMLEEEVLKLGLYIASVSTFDIRHRMECTMPVKSTPAKETSMPEIVVTSNVAQ
KQTNATQSKDNAGDEPDAAVSSQAAVVVEEADHDTPKQSPQKKQRTEGTLRNFFKPVMHT
IASVFTPSRSGQVQNHPPAEQQFKSEESPQLSASCMEEKGDEEVEACFKDSPQNDKGNEQ
DAMLKTPSQPCGDDFVTPKNNATKDVAMNQKSASVSVLNVKVSPIEKKKAVEPAAVAPMR
KNDRKLKKAQHPLMPWTDMMIQMKEDGMGYLNGTGLVSYYYLLPHCAGMKKSELTRHCKL
GDDYFVSEEDLQRYARQNLGWKGDVVSPTLLTESPKKRHPLREPTEPNSPQKRTKESAAQ
SKEDSPSKKPRPTPQSSPVPAQQSSPESVDGCPADKQSTAKDKLESCQLALHPSFKGKSR
IIAKSSTSTKVFEMEESIKDFMLKSMETGFDVSGMTSPSPGFMYICGGPGTGKTTLVNAC
ANDMKKWAKKNNYNKPHFCFFNMASVHTALNEKDGVMKLMLRKFAKELEIDKNSELKAYE
SRLKKKVLVLVLDEIDMFFKKRDGNGEAWFRTLTSWAEDKQLCFSMIGISNSVNDTYSTR
IREIGHPHELVFPAYNEGDILAILECRVGKKIVDYKALQLISRRVAASCGDARQALEITS
NAIGKCLDAMSDEQRLLKVMSDEALPLVKLPHVMRAIREGNAVRHADIISGLPQAAKVVL
CIAVSLSQVWGPRAEISVAQLKKYCVTATQHSLMDELDIGHIMNLVETLCDSGLLVAGNN
GHFDAHNPEAKLQIGVQLDEVECALEESLLSQGFYRSLVDYVKREKCSNSCS
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccaactcggagacctccgtcctagaccaacacctcgcctactctgacttttgc
gagccaccaccatcggcggctccagcagcaacaacacccaccgctccaccgtcaccgtca
catgccccttctccaccatcacatgaaccatcctccggagacgtctccgccaaccacctc
tggcccgcactcaaattcgactcgctcaaacaactcatggacaacctcaccgctgcctta
acaccacgcgttcaaacgtccaccatgtccataatgaaggccaaggtgacacttgcaatg
aacaccctgatgagagagtgtggtgtgaactttaccgcggatgcgagtagggggtgtggt
gtggcgtatttattgggacgagagaccgtgcgtcgttcgctcgtgttgcttctctatacg
aagcgaggggaggaggttgtttatgatcaaggagtcgttcatgacttttttggcaacttt
gaggagatgagtagtgccattggctattgtggtcaagaggagtttgttcatgcctacgct
ctagccatgggacggatggagagtgtggtccaagaggagggagagggattgggacaacag
ttggctagtttgaataattctgcaaggaagagtgtaatgcaaagtgctcaaaagagtggt
gccggagtggtggtgcagccggcacagaagaaggaggggaagaagtcagtgtatagtgtg
gaggaggttggggagaatgcattggaaaagatgatgaatagtgcagagaaagaagagaag
cagcagcctcccgtggagaccatcgagatgaacgggtgtgatgttacctcaccaatgcga
ggggatgattccttggattccgactcctccatggaagtggatgcctccgaaatgacttgg
gtggagatgtatgatcagttaaagacttcgggttggtgctacaagcacggtgttggtttg
attgattgggtgtgggttcatccttctcatgcgaatactcccgtatctgagctgttgaag
aattacgaggagggagaggactacgttacttcagagaatgagttgaaactgtatgctatg
cgtcgattagggtggaagggagatgattacggtgaggacaacaagggtgtgagccggtcc
aagaggagcagacagaagaatgaggcgttgcctgcacgtcgggcggtaaactcccccttg
ttggagaagaacaatccaatctccactcctgctcctgccgaatcagcactttcttcgtgg
cctgacatgtgggatatgatgaagacggatggatggatctacaagaaaggccctgcgttg
attgattggatttggatccatccttccaaggctgacatgaaaatgaatgatttgatgaag
cagggtaccgtaggagtggactatgtaacgtcagaggaggacttgatgaggtatgcaaag
acgtattacgggtggaggggtattgtggagtctcccgagtctagcaaggaggcggaaatg
gctgatcgtatcaagaagaggaagcgtagagagagcagtgctaaagcggaggcagcagcg
cctgtgactgagcctacgaggaagaacgttggcaaagggaagagcaggatgagcatctct
tcgggtgggaagcaactgatccaaatgaatagagcagctcttcgcaacagtcctgccacg
tctgcaacgagtgatgtgtcggatgctagtcgtttcagtgatggagctccgtctgagcag
agtgtgagttgtcgtacgaggagcagtgttgccggatctcccaccgtcagtgaaatggag
tttgggtttggatcaaccccatccgcaaagaagagaactgctccaaagaggctttcgtat
ggcaaggcgggtaggaataggagtgggcgaaagaagacggaggaggaagaggagagtgca
gagtctacgtcgggttatagcgagacttcggcaagtggtgccagcacgtcttctggttct
tctgggagtgcagagtcgtctgttgatgcaacttaccaaatcatggcgaataaggatgct
tggcttgcacttatgaagctcttcggttttacctttgcaagcggaaagtactattgcctc
cctgggaaggaaaacaagcctggttctgaatccaaagctgtggaaggggtgcattacttt
tcgtctttggaggagttgcgtaagaatctgtgtgcctacggccttcctacgagcaagaag
gcacttttagatgaggaacgtgttgacattgagcgttgggttcgttacgctcacgtggcc
aacctgcctgatggaggcatcataaaccctgcccacgctggagagccaatcaatcacatg
caggcgtggggtatgctccaaaagcttggattcaaacattccagtggtggatacaaagtg
caaaatcctgatattaccaagaatccattgaagtttgagcgtcagcaggacttttacgtc
catcttgctcgcttcggtatccctcgtgtcgatggtgcatctgaattgagtcaggcagat
cgtcttacgcttgaccttttcatttgcaatcctggagttgagaacgtgaacacattcaaa
cgtatcaatccttattgcaacgagatcactcctcgtagaccaagatctagaggtgcctct
caatcaaccgaggcagcctttggaggcgtatttgtttctcagggcattgttcagaagaat
gctacacgcaaccgaaagtatcatgttgcattcaatgctctcaagtctcaacggaatttt
ccttctaatcttcttagcaacgaggatgcaatggacatgctcatcgcaaactatggcttc
gatgaaaaggctggcaagggagattatacatacttttgcctaccaaacgttgtgcccaat
gagcaagtttttcttggagttgaatactttgagagcatccaagatttgagggtgaacttg
tgtgcctatggacttccaccgcaaggatcaaatgcgagtctcaccgacgaggagcaagag
gatttagaattttggattcgcactgctcatctgaagttatctcctgacgatgagaaacca
gcggtggtccatatgaagccacgccaagccaaagcaaccttggacaagctcggctatcaa
attagcaaggagttcgatcggtactgtctgcctaatgctgactttcacaacccagcgttt
ggaattggtggctttactactctccttgatttcttcaatcacattgcacgttttggattg
gttgcagctaaggataccgatgatatgttggaggaagaagtattgaagttgggcctgtac
atcgcaagtgtatctacgtttgacattcgccatcgcatggagtgcactatgccagtcaaa
tccacaccggcgaaagaaacatcaatgccggagattgttgtaacttctaacgtagcacaa
aaacaaacgaatgctactcaatcaaaagacaatgctggcgacgaacccgatgcagctgta
tcgagtcaagcagcagtcgtcgttgaagaagcagaccatgacacaccaaaacagtcccca
caaaagaaacaacgcaccgaaggtacattgaggaacttcttcaagccagtcatgcataca
attgcatccgtcttcactcctagtcgttctggccaagtgcaaaatcatcctccagctgag
cagcagttcaagtccgaggagagcccacagctatcggcttcttgcatggaggagaaggga
gacgaagaggttgaagcttgctttaaagactcgcctcagaacgacaagggcaatgagcaa
gacgcaatgctcaaaacgccctcacagccttgtggcgatgacttcgtcacaccaaagaac
aatgccaccaaagatgttgcgatgaatcaaaagtcagcgtcagtatctgtgctgaatgta
aaagtgtcgcccattgagaagaagaaggccgtagagccagcagctgttgctccaatgcga
aagaatgaccgcaaactcaaaaaagcgcaacatccactgatgccttggacagatatgatg
attcagatgaaggaggatggaatgggttatctcaatggtaccggtttagtttcttattac
tacctccttccccactgcgctggaatgaagaaatcggagctcactcgccactgcaagtta
ggcgacgactactttgtgtcggaggaagatttgcaaaggtacgcgaggcaaaatcttggg
tggaaaggagatgttgtgtctcctacattgctcactgagtctccgaaaaagagacaccct
cttcgtgagcccaccgagccaaactcgcctcagaaacgaacaaaagagtcagctgctcag
tcaaaggaagattctccatccaagaagccacgacccacaccgcagtcatcgccagtacct
gcacaacaatcatctcctgaaagtgtcgatggttgtcctgctgataagcaatccaccgca
aaggataaactcgaatcttgtcagctggctctccatccttcattcaagggaaagtcgagg
atcattgccaaatcatccaccagcaccaaagtatttgagatggaagaaagtatcaaagac
tttatgctcaagtcaatggaaactggattcgacgttagtggtatgacgtcgcctagtcca
ggcttcatgtacatatgtggcggtcccggcacaggaaagactactcttgtcaatgcatgt
gcaaacgacatgaagaagtgggcaaagaagaacaactacaacaagcctcatttctgtttc
ttcaatatggcttctgtccacacagcgttgaatgaaaaggatggggtcatgaagctgatg
ctgaggaagttcgcgaaagagttggaaattgacaaaaattcagagcttaaagcgtacgag
agtcgtcttaagaagaaagtgctcgtgttggtacttgatgaaattgatatgttcttcaag
aagcgtgatggcaacggcgaggcttggtttcgcactttgactagttgggcggaggacaaa
cagctctgcttcagtatgataggaatctccaacagtgtgaacgacacgtattcaactcgt
atccgtgagattggccacccacacgagctcgtctttcctgcatacaatgaaggtgatatc
cttgccatccttgagtgccgcgttggcaaaaagatcgtcgactataaagcactccaattg
atttcgaggagggtggctgcgtcttgtggtgatgcacgccaggcacttgaaatcacttct
aatgccattgggaaatgtcttgatgcaatgtcagacgaacaacgattgttaaaggtgatg
agcgatgaggctttgccactagtgaagttgcctcacgtcatgagggctattcgcgaagga
aacgcagtgaggcatgccgatattatcagtggtttgcctcaagctgccaaagttgtactt
tgtattgctgtctctttgagtcaagtatgggggccaagggcagaaatatcagttgctcag
ttgaaaaagtactgtgtaacagccactcaacattctctcatggatgagcttgacattggg
catatcatgaacttggtcgagactctctgcgactctggactgttggtagcagggaacaac
ggccactttgatgcccacaatccggaagccaagttgcaaatcggtgttcagttggacgaa
gttgagtgtgcgttggaggaaagtttgttgagccaaggcttttatcgcagtctggtcgac
tatgtcaaacgagagaaatgctcaaattcttgctcataa
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