KEGG   Thalassiosira pseudonana: THAPSDRAFT_8733
Entry
THAPSDRAFT_8733   CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
tps  Thalassiosira pseudonana
Pathway
tps03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    THAPSDRAFT_8733
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tps03400]
    THAPSDRAFT_8733
DNA repair and recombination proteins [BR:tps03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      THAPSDRAFT_8733
SSDB
Motif
Pfam: BHD_1 BHD_2
Other DBs
NCBI-GeneID: 7443294
NCBI-ProteinID: XP_002296556
JGI: 8733
UniProt: B8LBW0
LinkDB
Position
11
AA seq 944 aa
MSFQFDDNDSEEDIDLDDFDDTGLLALASRETAASRPSTDITSEVAAPRVAAELGVGITE
TSAYHDGEGDDRGDWSDVDWEDADQEDGEGEGIDSGGDGKQDNVDELQPRKFPSEGIMIN
FGASESNTNSTNSGDDNGDDAKDKEYKPKKWKRTRTLRDVPFATQQLVLNVRRAHMLCCI
SYSLGCSAVCGGGVMIHEDDIMKAASDDEMEGTRSFLTCLAHSLVPLEFHQSDTVDHGLQ
ATTKPKKSYIIPTTQQLHQFSQWYFGFVNRAGERRRAALERNVAQGAATTSFVVASRVSA
SKKRAITLGSNTNGRQATKSVELKDTKPPAKKQRRRGEADAPEDDEGGEKPSCTEPMMHQ
HYTSTTTSLVQKLKYFSPCYDEDPQLFIKEEGLDVIHAVESITPDEKVLIFLTMVRAMGW
RARYVVALNPLSLELTVDHPLLASNSELMSSTDCYGSLDQSNNKRVTKVPNEKEPNTNTD
NATMSETCLSWIEVLCGNDDSKLSNDDKRKPKSTPKQLVARWIPVFPEQETVDKPEEVES
ILAWIRDITTESSPSKKTTQTKKKSTRRNIARKSLRRQSSNSYAKKAPVSYVLATEHFPP
IMKSTTTPFDVSSKSLRGARFTDVTPRYANTWSRTLRLRGATARQLKAGGGKCVDEWWAT
SLKDINGMCSSAKNKSSLALANDIVNTEPEIRVSVTKTVSGSGKEVEVLEIDSSGDEKPA
AMDTNNDSGASDHDEHDNDESVELTKTTSKEAIPTSKKAFRENPFYVIPSVLNSQDVLHP
DAHKRICGVFKGELVYKRSDVSKALRAKKWLYEGRKVKENEIPTPAKQINARKKPTSQGQ
GFKALESYVTETTLPSKYSEAGDGNAMENLYGIWQTAPWSPPHVGPSDPIPTNEFKNVEL
ALLNPGLDLKVVGAIGHHLLEELSYIRITLSSCVKHISSGRVTP
NT seq 2835 nt   +upstreamnt  +downstreamnt
atgagcttccaattcgacgacaacgacagcgaggaagacattgatctcgacgactttgat
gatacgggactactggccctggcgtctcgtgagactgctgcctctcgaccgtcaaccgac
atcaccagcgaggttgctgcaccacgtgtggctgccgaacttggtgtagggatcaccgaa
actagtgcttaccatgacggcgagggagatgacagaggtgattggagtgatgtagattgg
gaagatgccgatcaagaagatggcgaaggagagggaattgactctggaggcgacggcaag
caggacaacgttgatgagttgcaaccacgtaagttcccctcggaagggatcatgatcaac
tttggtgcctctgaatcgaacaccaacagcactaattcaggggatgacaacggagacgac
gccaaagacaaagagtacaagcccaagaaatggaaaagaactagaacgctacgtgatgtg
ccttttgcaacgcaacaactggtcctcaatgtacgacgtgctcacatgctttgttgcata
agttactctttgggatgctcagcagtgtgtggtggtggagttatgatccatgaagatgat
ataatgaaagcagcaagtgatgacgaaatggaaggcacaagaagtttcctgacgtgcttg
gcacacagtctcgttcctttggagtttcaccaaagtgatacagttgatcatggattgcaa
gcaacaacaaaaccaaagaaaagttacatcataccaacaactcagcaacttcatcagttt
tcgcaatggtactttgggttcgtgaaccgtgcaggagaacgacgtagagcagctcttgaa
cgaaacgttgcacaaggagcagcaacgacatcttttgttgttgcttctcgtgtgtcggct
agtaagaaacgtgcaataacgcttggctcaaacactaatggaaggcaagcaacgaaatca
gtggagttgaaagatacgaaaccacctgcaaagaaacaaaggcgaaggggagaagctgat
gccccagaggacgacgaggggggtgagaagccttcttgtactgaaccgatgatgcaccaa
cattacacttcaaccacaacaagtcttgttcagaagctgaagtatttctcaccatgttac
gacgaagatcctcaattatttataaaggaagaaggactagacgtcattcatgccgtggag
agtatcactcctgatgagaaggtgttgatctttcttacgatggtcagagcaatgggatgg
agggcaagatatgtcgttgcactcaatcctctctcgctggagcttacagttgatcatcct
ctattggcgtccaactcggaattgatgtcgtcaactgattgctatggcagtcttgatcaa
agcaataataaacgcgttacgaaggtaccaaatgagaaggagccaaacacaaatactgac
aatgcaactatgagcgaaacgtgtctatcgtggattgaagttctatgtggaaatgacgac
agcaagctatccaacgacgacaagcgaaagccaaaaagcacacccaagcagctagttgcg
agatggattccagttttcccagagcaggagactgttgacaaacccgaggaagtggaatct
attcttgcgtggataagagacattacgaccgagagctcccctagcaagaaaactacacaa
acaaagaagaaatcgacaagacgtaacatcgcaaggaaaagtctacgtcgtcaaagctca
aacagttacgctaagaaggctcccgtctcttacgtccttgcaactgaacactttcctcct
attatgaaaagtacaactacaccatttgatgtgagcagcaaatcattgagaggtgcgagg
tttactgatgtaactccacgatatgcaaatacatggtcgagaacacttcgtttacgagga
gcaacagcaaggcaactcaaagctggaggaggaaagtgcgtagacgagtggtgggcaacg
agtttgaaagatatcaatggtatgtgcagcagtgccaagaacaaaagctcgcttgcttta
gcaaacgacatcgtcaacacggagccagaaatacgagtatcggtaaccaaaacagtatca
ggctctgggaaggaagtggaagttcttgagattgacagctcaggcgacgaaaagccggct
gcgatggataccaacaatgattcaggtgcatcggatcacgacgagcatgataacgacgag
tcagtagagttgaccaagacaacttccaaagaagcgataccgacgagtaagaaggcattc
agagagaatccgttctatgtgattccttccgtgctcaactcgcaggatgtgcttcacccc
gatgctcataaacgtatctgcggtgtcttcaaaggagaactagtctacaaacgcagtgac
gtgagcaaggccttaagggcgaaaaaatggttatacgaggggcgaaaggtgaaggagaac
gaaataccaacgcccgcaaagcaaattaatgcgaggaaaaagccaacttcgcaaggacaa
ggattcaaagcgctagaatcgtacgtcacggaaacaacacttccatcaaagtattcagag
gctggagacggcaatgcgatggaaaacttgtacggtatttggcaaacagcgccttggtct
cctcctcatgttggtccgtctgatcctattcctaccaatgagttcaagaatgttgagcta
gcactactcaatccgggcttggatttgaaggtcgtaggggcaatcgggcaccatctatta
gaggaattgtcgtacattcgcataacgttgagctcttgcgtgaagcacatatcgagtggg
agagtcacgccgtag

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