Thalassiosira pseudonana: THAPSDRAFT_8828
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Entry
THAPSDRAFT_8828 CDS
T01078
Name
(RefSeq) predicted protein
KO
K24748
WD repeat-containing protein 53
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tps04990
]
THAPSDRAFT_8828
Domain-containing proteins not elsewhere classified [BR:
tps04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
THAPSDRAFT_8828
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GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Beta-prop_RIG_2nd
ANAPC4_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
7444479
NCBI-ProteinID:
XP_002296609
JGI:
8828
UniProt:
B8LC59
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Position
11
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AA seq
523 aa
AA seq
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MTFTPPKIQKRTLKGHLQPVLCLAHSSERLAYYHSKKRTAIQRSDGDSDGVKSAADSDGC
THRHHPSLLLSGSEDGTARLWDLRQRKTAYCMIPPKKGGDVVEVTSVAFHPSLVEEIETK
TKDVDRKGGSLLGEGDCTVYVGAAMNIYGYDLRYHATESTTAPASPILKEPHFNLTSFFR
SKDEINQLSFSYPKHNDGRGRYSMSAVDDSGEVRVCEDVPFRYTQQSLDGNATKQPKVFY
HADPETQALASCAVFKPRVNDLYLASGGTDCMIKLWDVSKPRRPTYSTHIKPQSDNETTT
QLCNPPFVHSLAWSPSGRLLASAIGDGSCIIFRGEGRRLVEVGRLGWKEGGHGSAVASVC
FPGFGLCEAKGSSLQVTSKSLLNGTVDDRLMITAGNDCNVLVWDLGANMVGNDAVDPALY
LSRGGAIERGVDDSLTDIATDLDDMIIDNSSVKKKGKGGKPNDEAENSSDDDLIPSPPKV
LFQIPHRHKPNWITCSRASDTLLPCSLFVADTTNDISIYTLQI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcactcctccaaagatacaaaaacgtacactcaaaggccatcttcagccagtc
ctttgcctcgctcactcttcagaacggcttgcatattatcactcaaagaagagaacagcg
atacaacgttccgacggtgatagtgatggtgtcaaatctgccgccgatagtgatgggtgc
acccaccgacatcatccgagccttctgttgagtggatctgaagatggaactgctcgtctt
tgggatttacgacaaagaaagactgcttattgtatgatccctcccaagaagggcggtgat
gttgtggaggttacttcggtagcgtttcatccatcacttgtggaggaaattgagacgaag
acaaaagacgtggataggaaaggtggctcgttacttggtgaaggagattgcacggtatac
gttggcgctgctatgaacatctacggatacgatcttcgatatcacgcaactgaatcaacg
accgcaccggccagtcccatactaaaggagcctcatttcaatctgacatcattcttccga
agcaaagatgaaatcaatcaattatcattctcgtatccgaaacataatgatgggagggga
agatactcaatgtcggcggtagatgatagtggagaagtccgtgtatgcgaagacgttcct
tttaggtacacacaacaatcactagacggcaatgcaacaaaacaacccaaagtgttctat
catgcagatcctgaaacgcaagctctcgcttcttgtgcagtattcaagcctcgtgtgaat
gatttatacttggcaagtggtggcaccgattgcatgatcaagctatgggatgtatcgaaa
ccaagacgaccaacctactcaacacacatcaaaccacaatcagacaacgaaaccacaact
caactatgcaatccaccattcgtccactccctcgcttggagtccatcagggcgacttctc
gcatcagcaataggagatggatcatgcatcatctttagaggggagggacgacgattggtg
gaagtgggacgattgggatggaaggaaggtgggcatgggagtgcagttgcttcggtttgc
ttcccaggctttggactgtgtgaggctaagggatcttcgttacaagtaacgtcaaagtca
ttgttgaacgggactgtggatgatcgtttgatgattactgctggaaatgattgcaatgtt
ctcgtttgggatctgggtgcaaacatggtaggaaatgatgctgtggatccagcgttgtat
ttgagtagaggtggtgcaattgaaaggggggtagacgacagtttgacagatattgcaacg
gacttggacgacatgatcattgataacagtagtgtcaagaagaaaggcaaaggtggcaaa
ccaaatgacgaagccgaaaactcaagcgatgatgatctgataccgtcaccaccaaaggtg
ctgtttcagattccacacagacacaaaccaaactggattacatgcagtcgagcatctgac
actctgctgccgtgttcgttgtttgtggctgacacaacgaatgatatctcaatctacacg
ttgcagatttaa
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