Thalassiosira pseudonana: THAPSDRAFT_9195 Help Entry THAPSDRAFT_9195   CDS       T01078                                  Name (RefSeq) predicted protein   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism tps  Thalassiosira pseudonana Pathway tps03440   Homologous recombination tps03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:tps00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     THAPSDRAFT_9195    03450 Non-homologous end-joining     THAPSDRAFT_9195  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:tps03032]     THAPSDRAFT_9195    03400 DNA repair and recombination proteins [BR:tps03400]     THAPSDRAFT_9195 DNA replication proteins [BR:tps03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     THAPSDRAFT_9195 DNA repair and recombination proteins [BR:tps03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      THAPSDRAFT_9195     BRCA1-C complex      THAPSDRAFT_9195    NHEJ (non-homologous end-joining)     MRX complex      THAPSDRAFT_9195 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 SMC_N AAA_15 SbcC_Walker_B AAA_21 PUMA_CC ABC_tran AAA_29 Motif Other DBs NCBI-GeneID:  7443176 NCBI-ProteinID:  XP_002293244 JGI:  9195 UniProt:  B8CAM3 LinkDB All DBs Position 12:complement(814281..819376) Genome browser AA seq 1403 aa AA seqDB search MASISKLSIRGVRSFSPNDEEQVIGFCFPLTIIVGANGCGKTTIIESLKYAVTGSLPPGN KSGQSFVHDPKSIGQSSVKASIKLRFNNRGNHSMVVIRSMEVTQKKATANFKALDGILRT VDPNTGERTSLSHKCTELDKQIPHLMGVSKPILEHVVFCHQEDSSWPLQEGAVLKKRFDD IFDSTRYAKALEAIKGSRKEYASQVKDLKADLEGLKSHKHAASGFREEYEECKDKISGFD DEIDRCSKNIEEAKKKHNEAKKIQLAIEEFMSDLDMKRGEFEREEAVLAKQRELLGPDDL TGQYSMDELRGMLRELSDKHHGNQAVRALHDKEEEFEGIEKFLEGLRKKTNDLNSRKGKL EAEKDAHNVVLKQRFKLMEEIHKKHGVECDVTQTPDDDTLTQATAASRMSHSTVFTSGTG TTMDITISQEDIAAFERGLSQKEQTLRNTWEGAKRRHRNEEDAMQKEIADLQAKRSAVES DRRRINESKLEAMRELQAVGNQMSSAISRVRQSDVDEAKKQAADLARTRDELNNGSRRDD IAKEIKVQEDKLKSIASRIEQDMKIRKVLNDQKNEQSEIDMLEKQVSDEFLGLKDMLKDN SYVLSEHGEHNVTVTTEDPVSPVEVAANNIRRKHLDAEDDVNRANEAIADLNGKIAEKRA VLSQNNGRLQQLKNRANQLNAEGGAVQKVNNVVSAILRSDLYDPDLITADSKPSEIMQFL QDAISELSAIDVKPEVVSRILKPLKKKGKTDASCPCCLRDFVDMDETTRFMNQMNALVDP DTSELMEMISKKNKESTESLERFEKWRTAIAQNINECIEYTGVNNEIKDLEAFIAAEGEG ELKDLQDQDQSLKEKLSEKQKEASSLRTLLASLNTILDTARRIWTKEGQVKEKKEKLKYA FGYADLGNETRDLNTVEADLTKSNDAKEAAYTEINRLNGEQKDINDKISRVTNQAAAADR NAREKQDAFTRDQEASKRRDELNQLLGKLGDDDKELEKSLAPIRTHLLQKESDRDRMRTA NGYEESKLGEELRGFEKDISRLAEITDKIDFYDNSNKEREILDVETSLNENADAIKDEEA KLVSMKPEIEQLKKQVDDSERQKQKIQNNIDVLKLQKEVNDMEEEIGKLEDDAKDMGGED AARILNEANTIHRESQEMKAVAEGKRQMLAEQRRALKRKLNEPEYKDVEERHRVKMIEYE TTNIVVGDLDKYYDALDKALLRYHGMKINDINKIIKELWALTYKGEDITNIQITSDQDKA GRAARSYNYRIVMSKGNTTMDMRGRCSAGQRVLASIVIRLALAETFCLNCGVMALDEPTT NLDYENKRGLAIALAQIIASRAAQSNFQLVVITHDEDFVSMMKNELSSQTGFNMPERYYQ VSREEGHDGRFYSKINAIDWDEL NT seq 4212 nt NT seq  +upstreamnt  +downstreamnt atggcatccatctccaaactctccatccgcggagtccgatccttctcacccaacgacgaa gaacaagtcatcggcttctgcttccccctaaccatcatcgtcggtgccaacggatgcggt aaaaccacaatcattgaatcactcaaatatgccgtaactggttcgttacccccggggaac aaatcgggacaaagttttgttcacgatccaaagagtattggacagagtagcgtcaaggct agtattaagcttcggtttaataacagagggaatcattccatggtggttattaggagtatg gaggtgacgcagaagaaggctactgcgaatttcaaagcgttggatgggatattgaggact gtggatccgaacacgggggagaggacgagtctttctcacaagtgcacagagttggataag cagattcctcatttgatgggggtttccaagcctattttggagcatgtggtattttgtcat caggaggactcatcgtggccgttgcaggagggggcggtgctcaagaagagatttgatgac atttttgatagtacgaggtatgccaaggctttggaggcgatcaaggggtcgaggaaggag tatgccagtcaagtgaaggacttgaaggctgatttggagggattgaaatcacacaaacat gcagcatcgggtttcagggaggagtatgaggagtgcaaagataagatatcgggatttgat gatgagattgatcgttgcagtaagaacatagaagaggcaaagaagaagcataacgaggca aagaagattcagctggctattgaggagttcatgtcagacttggatatgaagaggggagag tttgagagggaggaggccgttctggcaaaacaacgtgagttattgggaccggatgatctt actgggcagtattcaatggatgagttgagaggtatgcttagggagttgagtgataagcat catgggaatcaggccgtgagggctttgcacgataaggaggaggagtttgaggggattgaa aagttcctcgagggattaagaaagaagacgaatgatcttaactcgaggaagggaaagctg gaggctgagaaggatgctcacaacgttgtcctcaaacagcgattcaagttgatggaggaa attcacaagaagcatggcgttgagtgtgacgtgacccagacgccagacgatgatacgctg actcaagcaactgctgcctcccgaatgagtcacagcactgtattcacctctggcactggc accaccatggacattaccatttctcaggaggacattgctgcgtttgaacgtggactatct cagaaggagcaaactttgaggaatacgtgggaaggtgccaagaggaggcaccgaaacgag gaggatgcgatgcaaaaagagattgctgacttgcaggccaagaggagtgccgtggaaagt gacaggagacgcatcaacgagtccaagttagaagcaatgcgggagctgcaggctgttgga aaccagatgtcgtctgccatttctcgtgtgcgtcagtcagacgtggatgaagcgaagaag caggcggctgacttggctaggacacgtgatgaattgaacaacggatctcgtcgtgatgac attgccaaagagatcaaggttcaagaagataagctcaagagtatcgcttcccgaatcgag caggacatgaagatccgcaaggtattgaacgaccaaaagaacgaacaatctgagattgat atgctggagaagcaagtctctgatgagtttcttggcttgaaggatatgctcaaggacaat tcgtatgttctcagcgaacacggagagcacaatgtcacagtgacaacggaagatcccgtg agtccagttgaagttgctgctaacaatatccgtaggaaacatcttgatgccgaggatgat gtcaacagagccaacgaagccattgccgacttgaacggcaaaatcgcggagaagagggca gtgctcagccaaaacaacgggaggcttcagcagctaaagaacagggccaatcaactcaac gctgagggaggagcagttcaaaaggtcaacaacgtcgtcagtgccattcttcgctctgat ctatacgaccctgatctgatcactgctgactcaaagccttcagagataatgcagtttctg caagatgcgatatctgagttatcggccattgatgtgaagccggaagttgtctcaaggatc ctaaagcctctcaagaagaaggggaaaactgacgcatcttgcccctgttgcttgagggat ttcgttgatatggatgaaacaacgaggtttatgaaccaaatgaatgccttagtggatcct gataccagcgaattaatggagatgatctcaaagaaaaacaaggagtctaccgaatctttg gaacgctttgagaaatggaggactgccattgctcagaacatcaatgaatgcattgaatac actggcgtgaataatgaaattaaggacttggaagctttcattgccgctgagggggaggga gaactgaaagatctccaagaccaggaccaatctctcaaagagaagttgtcggagaaacaa aaggaggcgtcatctctccgaaccttgctcgcgtctttgaataccatcctcgacacggca aggcgtatttggacaaaggaaggtcaagtgaaggaaaagaaagaaaaactcaagtatgct tttggatacgctgatttgggaaacgaaactcgcgatctaaatactgttgaagcggatcta accaagtctaatgatgcaaaggaagccgcttacaccgagatcaatcggttgaatggtgag cagaaagatatcaacgataagatttctcgcgtgacgaatcaagctgccgctgctgatcgc aacgctcgtgagaagcaggatgctttcacccgcgatcaagaagcatcaaagcgccgtgac gagttgaaccaactactgggaaagttgggcgacgacgacaaagagctcgagaagtcattg gctcctattcgaacccatctcttgcagaaggagtccgacagagaccgtatgcgtaccgcc aatggctatgaagaatcgaaattgggtgaagagttgagaggctttgagaaggacatctcc cgtctcgcggaaatcaccgacaagattgatttctacgacaattcgaacaaggaacgtgaa atccttgacgtcgagactagtttaaacgagaatgctgacgccatcaaggatgaagaggca aagctcgtttccatgaaacctgagattgagcagctgaagaagcaagtcgatgactcggag cgacagaagcagaagatccagaacaatattgacgtgttaaagcttcagaaggaggtgaat gatatggaggaggaaataggcaaattggaggatgacgcaaaggatatgggaggtgaggat gctgctaggatattgaacgaagccaataccatacaccgcgagagtcaagagatgaaggcg gttgctgaaggcaagaggcaaatgttggccgagcagaggcgggctctgaagagaaagctc aatgaaccggagtacaaggatgtggaagaacgtcatcgcgtgaagatgattgagtacgag acgacaaacattgttgttggcgatttggacaagtactacgacgcactcgacaaggctctt cttcgctaccatggcatgaagatcaatgatatcaacaagattatcaaggagctctgggcg ttgacgtacaagggtgaagacataacaaacatccagatcacttcagatcaagacaaggct ggccgtgctgctcgttcgtacaactatcgtatcgttatgtctaaaggcaacaccacgatg gacatgagaggacgctgcagtgctggccagcgtgtactcgccagtattgtcatccgtctg gccctagctgaaactttctgcctcaattgcggtgtcatggctttggatgagccgactacc aatcttgattacgagaacaaacgtggattggccatcgccttggctcagatcattgcatct cgcgctgctcagtccaatttccagttggttgtcatcactcacgacgaagactttgtcagt atgatgaagaacgagctctcttcgcagacaggcttcaacatgcccgagcgttactatcag gtgtctcgggaggaaggtcacgatggacggttctattccaagatcaacgccattgactgg gatgagttgtaa

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