Thalassiosira pseudonana: THAPSDRAFT_9684
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Entry
THAPSDRAFT_9684 CDS
T01078
Name
(RefSeq) predicted protein
KO
K10997
replication fork protection complex subunit TIMELESS/Tof1/Swi1
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_9684
03400 DNA repair and recombination proteins [BR:
tps03400
]
THAPSDRAFT_9684
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Fork protection complex
THAPSDRAFT_9684
DNA repair and recombination proteins [BR:
tps03400
]
Eukaryotic type
Check point factors
FPC (fork protection complex)
THAPSDRAFT_9684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIMELESS
BACON_2
Motif
Other DBs
NCBI-GeneID:
7451623
NCBI-ProteinID:
XP_002293861
JGI:
9684
UniProt:
B8CBZ9
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Position
14:complement(89582..93404)
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AA seq
1135 aa
AA seq
DB search
MSAAYTSAAAAAAPHIRPQQQRSPTSVASPDNNAARTSSKPTSAAAAKAAASGAALGAAA
AASIGRAGGGGGSNVTPPSKQQQTKKKRTNNITAAAARAKHPEMTVDKRIIDELLLVCGV
IGSTAASAEGATAADGSNNAASKGAPNANNAPEFIPVTDCLNWLQDLQRALRRDHDQFRP
IALLLGQWRIVASKLLPLVCSCRYDRGLVLTVCKILVILTKPLSDNTKRAGRLTIDVKSG
KVDESVIQEQITLRDNAIAQSELLMEYKKLFVKHHTHHYAFQSSSKASNNNSGDDINNNS
GTGLLSIFTSLLAEPLSKTGSSRTSTDHLTIELVLHLIRNLLTISPINTFGSTEKSQYAS
QLHRELVILLEKEMVLSVLVCVGQEVEKRENSGYNLLLMEIMSCLLRGMDPSDVALSVNE
SSIQPISKAPAPVIGKGKNKGKPIRTITTTKASTALTIGANSLRVHLQCERQKLQLSAQS
RHSHFGGTLMISKPGGKQSYVSATDYLAQKSGGTGGHGVKGSAIGQPVRRKNKKAEVFVG
SGKSSALNARPGASAAFSRETAGPIAKRAKLALNSFCEKFMGQCYGPVMKSLKNEFRRDS
NRLEDGDRTMFFRIVWFFHQWWRVRKQNGGFKDDTKAVTVEGGEDVAGSTSSMAQNLIFT
MDVFMFNLVLNSTDEFFEHKKPAELAQTVSLYTEMIHMLHAMYDSEDSTERMMALGLMDR
IYYAAEPLDRLPKLLSRWTPGMFSREYLCDLVECSHVTWKLLDGNAERCLQSLGPDELER
KRPKDAVERMNLTASEFDKDAYFMRKFVSNHIVFMHTQLLSQYAVNAAHINRHIAAYFIR
LCKFSIKQGDGDLDYDDVLGKNELASKQATLEPMLYNIGLFTVMEAILNDQGIRDKEDFS
ALLMFASSFMKRFARASEANPMLFVEALFKHPIPHRFCEFTTNMYVNEELRMIAVRDLLL
EDQKRYEQQSDEDGEDRNNGKDGVVAGNDGPGGYASEDEEEVEFNGDDLDEGEFVPGKKR
RKRSTKRGSKRAAVSALMREEEEQPGDDGNGEEAEFGGDNEQSETAEETMGRTSLTKAEA
GDQSNVAEANAAPPKSSGKKRIRKSSVFEESDDEDFDTVPAKSMKRAIFEDDEDD
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagcctacacatcagcagcagcagcagcagcccctcacatcagaccccaacaa
cagcggtcacccacgagcgtcgcctcccccgacaacaacgctgccagaactagctccaaa
ccaacgagcgccgcagccgccaaggcggcagcctcgggagccgcactcggagcagctgcc
gctgcgtctatcggtcgtgcgggcggcggaggggggtctaacgtcactcctccatccaaa
caacaacagacgaaaaagaagcgtacgaacaacatcacagccgccgcagcgagggcgaaa
catcccgaaatgacggtggacaaacgaatcattgacgagctgctgttggtttgtggagtt
atcggcagcaccgctgcaagcgcagaaggagcgaccgccgctgacggatcgaacaacgca
gccagcaagggcgcgcccaacgcaaacaatgcacccgaattcatcccggtgaccgattgt
ctcaactggcttcaagatctgcaacgtgccctacgccgtgatcacgatcaattccgtccc
attgctttgttgttaggtcagtggagaatcgtggcgagtaagttgctgcccttggtttgt
agctgtcggtatgatcgggggttggtgttgacggtttgtaagattttggttattttgacc
aagccgttgagcgacaataccaaacgcgccgggcgcttgactattgatgtcaagagtgga
aaggtggatgaaagcgtcattcaagaacaaatcaccctacgcgacaatgccatcgcccag
tccgaacttctcatggaatacaaaaagttgtttgtcaagcatcatacacatcattacgca
tttcagagtagttccaaagcatccaacaacaacagtggagacgacataaataacaacagt
ggaactggccttctctccatcttcacctccctcctagccgaacccctctctaaaacaggc
tcctcccgtacttccacggatcaccttaccattgaactagtcctccatctcattcgaaac
ctcctcacaatatctcccataaacacgtttggaagtacggagaagtcacaatatgcgagt
cagttgcatagggagttggttatcttgttggagaaggagatggtgttgagtgtgttggtg
tgtgtagggcaggaggttgagaagagggagaatagtggatataacttgctgttgatggag
attatgagctgtttgttgaggggaatggacccatccgatgtagctctatcggtcaacgaa
tcctccatccaaccaatctcaaaggcaccggcacccgtcattggcaaaggaaagaataag
ggcaaaccaatccgtacaatcacaacaaccaaagccagcacggcactcaccattggtgca
aactccctccgcgttcacctccaatgcgaacgtcaaaagttgcaactctctgcacaatct
cgtcattctcactttgggggtactctaatgatctccaaaccaggagggaagcagagctat
gtctctgccaccgactaccttgctcagaaatcgggtggtactggaggccatggtgtcaag
ggaagtgccatcggtcaacctgtacgtcgtaagaacaaaaaggccgaggtctttgtcggt
tctggaaagtcatctgccttgaatgctcggcctggagcttccgccgccttttctcgtgag
actgctggtccgattgccaagcgtgccaagttggcactgaactctttttgtgagaagttc
atgggacaatgctacgggccggtgatgaagagtttgaagaatgagtttcgtagagattca
aatcggttagaggatggggataggaccatgttctttaggattgtgtggttctttcatcag
tggtggagggtgaggaagcagaatggagggttcaaggatgatacgaaagcagtgacggta
gaaggaggagaggatgttgccggttcaacgagctcaatggcgcagaatctcatttttact
atggatgtcttcatgttcaatcttgtcctcaactccaccgatgagttctttgaacacaaa
aaaccagcagagcttgcccagactgtctccctctacactgaaatgattcatatgcttcat
gcaatgtatgactcggaagactctacggaacgaatgatggcattgggtctcatggatcga
atctattacgctgctgaaccgttggatcgattgcccaagctcttgtctcgatggactcca
ggtatgttcagccgagagtacctctgtgatctcgtggaatgctcccatgttacttggaag
ttgctcgacggtaatgccgaacgatgcctacagtctcttggaccggatgagttggagagg
aaacgtcccaaggacgccgtggagcgaatgaatctgactgcttccgagtttgacaaggat
gcctacttcatgaggaagttcgtctccaatcacattgtgtttatgcacactcagctcttg
tcgcagtatgcggtgaatgccgcccacatcaaccgtcacattgcagcgtactttattcgt
ctgtgcaagttctccatcaagcagggagacggagatctagattacgacgatgttcttgga
aagaatgaacttgcgtcgaagcaagccacgttggaacccatgctttataacattggtttg
ttcaccgtaatggaggccattctcaacgatcaaggcattcgtgacaaggaggacttttcg
gcgttgctcatgtttgcttcgtcgttcatgaaacgattcgctcgtgcatcggaagccaat
ccaatgttgtttgtggaggcgttgttcaagcaccccatccctcatcgtttctgcgagttc
accaccaacatgtacgtgaatgaggagcttcgtatgatagcagtgcgggatttgttgttg
gaggatcaaaagcggtatgagcagcagtcagatgaagatggtgaggacagaaacaatggc
aaagatggtgtagtagctggcaatgacggtccgggaggatatgcgagtgaggacgaggag
gaagtggaattcaacggtgatgatttggatgagggtgaatttgtcccagggaagaagcgt
cgtaagcgtagcacgaagcgaggctccaagcgtgctgctgtttctgcgttaatgcgagag
gaggaggagcaacctggtgacgacggaaatggagaggaggccgagtttggtggggacaat
gaacagagcgagacagcagaggagactatgggacgcacgtctctcacgaaagctgaagcc
ggagatcaatccaatgttgctgaggccaatgctgcacctcccaagtcgagtgggaaaaaa
cgaattcgcaagtcttctgtctttgaagagtcggatgacgaagactttgataccgtccca
gcaaagtcgatgaaacgtgctatatttgaggatgacgaagatgattaa
DBGET
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