Thalassiosira pseudonana: THAPSDRAFT_9840
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Entry
THAPSDRAFT_9840 CDS
T01078
Name
(RefSeq) predicted protein
KO
K21398
natural resistance-associated macrophage protein 2
Organism
tps
Thalassiosira pseudonana
Pathway
tps04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
THAPSDRAFT_9840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tps02000
]
THAPSDRAFT_9840
Transporters [BR:
tps02000
]
Solute carrier family (SLC)
SLC11: Proton-coupled metal ion transporter
THAPSDRAFT_9840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nramp
Motif
Other DBs
NCBI-GeneID:
7452682
NCBI-ProteinID:
XP_002293935
JGI:
9840
UniProt:
B8CCF6
LinkDB
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Position
14:complement(507218..508928)
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AA seq
517 aa
AA seq
DB search
MQDANELNERSLHHEDDDSSCVEEAPIKEQSTKTKTALWEPSNVWWKDFLYFSGPGWFVS
IAYVDPGNYQADIQAGSTSRYNLLFALWWTAILSIYVQILCVRLAFHTKMSLAEVQAKSC
RTKVGKYFAWIVAEFTTIVTDLPGVIGFGIALHHFFGWPYYIGVLLSLVTTMVFLATLNY
GVRILEFVLFVFVGIMSVSIWVETALVSPKTTELMKGWIYGFVELDKSDVFSITGILGAV
VMPHNLYLHTAAVQSRVEHLKQEPGVMEKALTFSSIEPVAPIIVTFFVNLGLVSIAAEQV
YGSENADSVGLTDFCTYFQSLKGGCVMWAIALLASGQSGAITTTFTGQSVMDGFLNIRLP
AAVRAVGTRLLAITPCVIVSILFPDNLNGLVNNVNALLSVLLPFAFTPLVKFNCSESIMG
KGKASEGTEKTVLHAFAITVWAINAIALSVEGGGYFGDIMAEMETSTEKVLLILLQIGIQ
SFYAWWVFSTLFGSIECIVESERCEDEDKETLDVDTL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacgcaaacgagttgaacgaacgctctctccatcacgaagatgacgatagtagt
tgtgtggaagaagctcccatcaaggagcagtccaccaagaccaagacggcactttgggag
ccgtcaaacgtttggtggaaggatttcctgtacttctcgggtccgggatggttcgtcagc
attgcctacgtcgatccaggaaactaccaagccgacatccaagcaggatctacctcccgc
tacaatctcctctttgctctatggtggactgccattctatccatctatgttcagatcttg
tgtgtgagattggcgtttcataccaagatgtcattggctgaggtacaggcgaagagttgt
agaactaaggttgggaagtattttgcatggattgttgctgaattcacaacgatagtcact
gatttaccaggagttattggttttggaattgcactgcatcacttcttcggttggccgtac
tatattggagtcctcctctccctcgttacaacaatggtattcctcgccactttaaactac
ggagttcgaattctcgaattcgtcctctttgtgttcgtaggcatcatgtccgtgtccatc
tgggtagaaacggcattggtatcgcccaagacgacagagttgatgaaaggatggatctac
gggtttgtggagcttgataagtcggacgtattttccattactgggattctaggagcggtg
gtaatgcctcataacttgtatttgcacactgcagctgtgcagagtagggtggagcacttg
aaacaggagccaggtgtaatggaaaaggctctcacgttttcttccattgagccagtggct
ccgattatagtcaccttcttcgtcaacttgggtctagtatccattgctgcagagcaagtg
tatggctccgaaaacgcagattccgttgggttgactgatttctgcacatactttcaaagt
ctaaaggggggttgtgtaatgtgggcgatcgcattgctggcaagtggacagtctggcgca
atcactaccactttcactggtcaaagtgtcatggatggattcctcaacattcgtttgcct
gcagctgtaagagccgttggtactcgacttctagccatcacaccttgcgtcatcgtttca
atcctcttcccagacaacctcaacggtcttgtgaacaacgtcaatgcattgctttcggta
ttgctgccatttgctttcactcctttggtcaagtttaactgcagtgagagcatcatgggc
aaaggaaaggcttcagaaggaactgaaaagacagtcctgcatgccttcgcgatcacagta
tgggcaatcaatgctatcgcactatcggttgaaggaggagggtactttggcgatatcatg
gctgaaatggagacgtcgacggaaaaagtactcttgatacttcttcagattggtatccag
tcgttttacgcatggtgggtcttctccactctctttggatcaattgagtgtatcgttgaa
tcagaacgttgtgaggacgaagacaaggaaacacttgacgttgacacgttatga
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