KEGG   Thalassiosira pseudonana: THAPSDRAFT_bd1193
Entry
THAPSDRAFT_bd1193 CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K12847  U4/U6.U5 tri-snRNP-associated protein 2
Organism
tps  Thalassiosira pseudonana
Pathway
tps03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    THAPSDRAFT_bd1193
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tps03041]
    THAPSDRAFT_bd1193
Spliceosome [BR:tps03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    THAPSDRAFT_bd1193
SSDB
Motif
Pfam: UCH zf-UBP UCH_1
Other DBs
NCBI-GeneID: 7447681
NCBI-ProteinID: XP_002297362
JGI: bd1193
UniProt: B8LEB3
LinkDB
Position
Unknown
AA seq 487 aa
MTSTNSTACPYLDTINRTHLDFDFSPHCSSTLESSPHIYACLVCGKFFRGKGRQTPAYTH
SVEEGHFVFVHLSNGTFWCLPDGYEISTKEEPSLSDISLALNPSFTSEEVGRLDDNQELA
RDLFGRRYLPGFVGLNNLNKTDYLNCVVQALAHVRPLRDFFLLAGSQTSHQPLSYANFSP
LAKAFSLLLRNMWSSHRFKSNVDPHMLVQAVSVASNKRYHVGKQAEAGDFLAWLLHQLHV
GIGGSVGKKKRSSGGSTVIHQTFMGKVETVARKQLKRETLTSLASETVIVEESTVTETDF
LQLTLDIPEKPLFKDADGGLVIPQEPLVNVLRKFDGVSFCDALALQKSEEASASNTVDGG
SVVVSKKRRYRLKKLPNYLILHLSRFKHNNFTVEKNPTIVMFPVKNFDLNKYDLVANITH
DLPAEVGREGKQRNPLEEGSYRCHVQHKATGQWYEIQDLDVRETMPQLIGVSESYLLIFE
RKGATKS
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgacatccaccaacagcaccgcctgcccgtacctcgacaccatcaaccgcacccatctc
gactttgacttctccccccactgctccagcacgctcgagtcgtccccccacatctacgcc
tgtctcgtctgcggcaaattctttcgcggcaaggggcgccagactcccgcgtacacccac
tccgtcgaagaggggcattttgtgtttgtccatttgagcaatgggacgttttggtgtctg
ccggacgggtacgagatttctacgaaggaggagccgagcttgagcgacatttcgttggcg
ctgaatccgtcgttcacgagcgaggaggtggggaggctggacgacaatcaggagctggcc
agggatttgtttgggaggcgctatctgccgggatttgtggggctgaataacctgaacaag
acggattatttgaattgcgtggtgcaggcgttggcgcatgtcaggccgctgagggatttc
ttcttgttggctgggagtcaaacgtcccatcaacctctctcctacgccaacttttctcca
ttggccaaagcattctcactccttcttcgcaacatgtggtcttcccatagattcaagtcg
aatgttgatccacacatgctcgttcaagccgtctcagtagcttccaataaacgatatcac
gtggggaaacaagccgaggctggtgactttctagcgtggttgttgcatcaacttcatgtg
gggattggagggtcggttggaaagaaaaagaggagcagtggaggaagtactgtaattcat
caaacgtttatgggcaaagtggaaacggtggcacgaaagcaactaaaacgcgaaacactc
acgtcacttgcctctgaaacagtcattgtggaagaatctaccgttactgaaactgatttc
ttacaattaacgttggatattcccgaaaagcctctcttcaaagatgctgatggaggattg
gtcattccacaggagccattggtcaatgtgttgagaaagtttgatggtgtttccttctgt
gacgctttggctttgcaaaagtcagaagaagctagtgcaagcaacactgttgatggaggg
agcgtggtagtctccaagaaacgacgataccgactcaaaaagctacccaactacctcatt
ctgcatctgagtcggttcaaacacaacaacttcacagtagagaagaatccaactattgtc
atgttccccgtgaagaattttgacttgaacaaatacgatctcgttgcgaacattacacac
gatctgccagccgaggtgggaagggaggggaagcaacgcaatccgttggaggaggggagt
tatcgttgtcacgtgcagcataaggctacggggcagtggtatgagattcaagatttggat
gtgagggaaacgatgcctcagttgattggtgttagtgagagttatttgttgatctttgag
aggaagggggctacaaagtcatga

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