Thalassiosira pseudonana: THAPSDRAFT_bd1318
Help
Entry
THAPSDRAFT_bd1318 CDS
T01078
Symbol
atpF
Name
(RefSeq) plastid thylakoid ATPase subunit, plastid protein
KO
K02109
F-type H+-transporting ATPase subunit b
Organism
tps
Thalassiosira pseudonana
Pathway
tps00190
Oxidative phosphorylation
tps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
THAPSDRAFT_bd1318 (atpF)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
tps00194
]
THAPSDRAFT_bd1318 (atpF)
Photosynthesis proteins [BR:
tps00194
]
Photosystem and electron transport system
F-type ATPase [OT]
THAPSDRAFT_bd1318 (atpF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_B
MscS_porin
AlkZ-rel
MSC
PTS_IIA
TOR1L1_C
Spc24
NorB_cytochrome_c-like
YkyA
Motif
Other DBs
NCBI-GeneID:
7447408
NCBI-ProteinID:
XP_002297548
JGI:
bd1318
UniProt:
B8LER3
LinkDB
All DBs
Position
Unknown
AA seq
179 aa
AA seq
DB search
MENFNQIFTVLAASEGIGLNLDILETGLLNILALVAILVYTGKDFLGSILQERKSTIVKS
VQDAEDRLNEANRRLSEAQKQLSQAHVVISEIRNETKTAKTNLLKSDATTAKKELTTRFN
RAISSFRSKERVIFLDVKQQIISLVLKRSAIQAKETFGSKKRARALINETIQKLEGDLL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattttaatcaaatttttaccgtacttgctgcaagtgaaggtattggattaaat
ctagatattctagagactggccttttaaatattctggctttagttgccattttagtttat
acaggtaaagatttcttaggatctattttacaagaaagaaagagcacaattgtaaaaagt
gttcaagatgcagaagatagattaaatgaagcaaacagacgtttaagtgaagctcaaaaa
caattaagtcaagcacatgtagttatttctgaaattagaaatgaaactaaaacggctaaa
acaaatttacttaaatctgatgctactacagcgaaaaaagagttaacaactcgttttaat
cgtgctatctcaagtttccgttctaaagaacgagtaatctttttagatgttaagcaacaa
ataatttcattagttttaaagcgtagtgcaatacaagctaaagaaacatttggctctaaa
aaacgtgcacgtgcattgattaatgaaactattcagaaattagaaggagatttattatga
DBGET
integrated database retrieval system
