KEGG   Thalassiosira pseudonana: THAPSDRAFT_bd1545
Entry
THAPSDRAFT_bd1545 CDS       T01078                                 
Symbol
PSBC
Name
(RefSeq) PSBC, photosystem II 44 kDa reaction center protein
  KO
K02705  photosystem II CP43 chlorophyll apoprotein
Organism
tps  Thalassiosira pseudonana
Pathway
tps01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   00194 Photosynthesis proteins [BR:tps00194]
    THAPSDRAFT_bd1545 (PSBC)
Photosynthesis proteins [BR:tps00194]
 Photosystem and electron transport system
  Photosystem II (P680 chlorophyll a) [OT]
   Main subunits
    THAPSDRAFT_bd1545 (PSBC)
SSDB
Motif
Pfam: PSII
Other DBs
NCBI-GeneID: 7447394
NCBI-ProteinID: XP_002297534
JGI: bd1545
UniProt: A0T0T1
Structure
LinkDB
Position
Unknown
AA seq 471 aa
MKTLYSLRRYYHVETPFNSSIAGRDIESTGFAWWSGNARLINVSGKLLGAHVAHAGLMVF
WAGAMILFEVSHFVPEKPLYEQGFICMQHLATLGYGIGPGGEITSTVPYFAVGVIHLISS
AVLGFGGIYHSLLGPDTLEESFPFFGYDWRDKNKMTTILGIHLCLLGLGALLLVAKAMYL
GGVYDTWAPGGGDVRYITTPTLNPIVIFGYVFRSPFGGDGWVVSVNNMEDLVGGHIWVGI
LCIVGGVWHIFTKPFSWARRAFVWSGEAYLSYSLAAISLMGFTASLYAWYNNTAYPSELY
GPTGPEASQSQAFTFLVRDQRLGANVSSAQGPTGLGKYLMRSPSGEIIFGGETMRFWDLR
APWVEPLRGPNGLDINKIKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNYVSP
RSWLCCSHFFLGFFFLIGHWWHSGRARAAAAGFEKGINRANEPVLSMRPID
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgaaaactttgtattccctgaggaggtattaccacgtggaaacgccctttaatagtagt
atagcaggtcgagatattgaatctacaggctttgcttggtggagtggaaacgctcgttta
attaatgtctctggtaaattattaggtgctcacgtagcacatgctggtttaatggtattt
tgggctggtgcaatgatcttatttgaagtatcacactttgttccagaaaaacctttatat
gagcaaggttttatttgtatgcaacatttagcaacattaggctatggtattggcccaggt
ggtgaaattacatcaactgttccatactttgctgttggtgttattcacttaatttcttct
gctgtattaggttttggtggtatttaccactcattattaggtccagatactttagaagaa
tcattcccgttcttcggttatgactggcgtgataaaaataagatgactactattttaggt
attcacttatgtttattaggtttaggtgcattattattagttgcaaaagctatgtactta
ggtggtgtttacgatacatgggcaccgggtggtggtgatgttcgttatattacaactcca
acattaaatccaatcgtaattttcggttacgttttccgttcaccttttggtggcgacggc
tgggtagtttctgtaaataatatggaagatcttgttggtggtcatatttgggtaggaatc
ttatgtattgttggtggtgtatggcatatctttacaaaaccattctcttgggctcgtcga
gcttttgtatggtctggtgaagcatatttatcatacagtttagctgcaatttcattaatg
ggattcactgcatctttatatgcttggtataacaatactgcttatcctagtgaattatat
ggtccaacaggtcctgaagcatcacaatctcaagcgtttacattcttagtacgtgatcaa
cgtttaggtgctaatgtatcatctgcacaaggtccaactggtttaggtaaatacttaatg
cgttcaccaagtggagaaattatctttggtggtgaaactatgcgtttctgggatttacgt
gcaccttgggttgaaccattacgtggtccaaatggattagatattaataaaattaaaaat
gacattcaaccttggcaagaacgtcgtgctgctgaatatatgacgcatgcaccattaggt
tcattaaactcggttggtggtgtagcaacagaaattaactcggtgaactatgtatcacca
cgttcatggttatgttgttctcatttcttcttaggcttcttctttttaattggtcattgg
tggcattctggtcgtgctcgtgcagcagcggctggtttcgaaaaaggtattaatcgtgca
aacgaacctgtattatcaatgcgtccaattgattaa

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