Thalassiosira pseudonana: THAPSDRAFT_bd1692
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Entry
THAPSDRAFT_bd1692 CDS
T01078
Name
(RefSeq) SNARE component
KO
K08495
golgi SNAP receptor complex member 1
Organism
tps
Thalassiosira pseudonana
Pathway
tps04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
THAPSDRAFT_bd1692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_bd1692
Membrane trafficking [BR:
tps04131
]
SNARE
SNAP-25[N] (Qb)
Gos1 (Gos28)
THAPSDRAFT_bd1692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Tim17
kleA_kleC
CENP-Q
Motif
Other DBs
NCBI-GeneID:
7453238
NCBI-ProteinID:
XP_002297585
JGI:
bd1692
UniProt:
B8LEY8
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MDSFPPTTTNNNNNSGGSGLSPAIAAGSSYYGLSPEQASREFDSLRREATRLERSLEDRV
ARYGQLARRLTMGDNTNNLDSIESGTSYYSDKQSSTTSSSNTKKIDEEESALSKEIHRTM
STMTELINTKMAPCAERTGRSQHSLLVKRYREILFDCGADFKKTSAGVARRREAMELFRG
SNDNKGENGTDPAMEQLLRERNAIDNSMKSASSVLNQASSVRSELRSQGASLRGVGGTMA
SIAGNIPGVNNLIERIRQKRMRDDKVVGGVVAGCILFTLWYLFG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggactcatttccacccaccactaccaacaacaacaacaacagcggcggcagtgggcta
tcacccgccattgccgcagggagcagctactacggcctctcgcccgagcaggcctcacga
gaatttgactcgttgagaagagaggctacgagattggaacggagtttggaggatcgggtt
gctagatatggccagctagcacgacgtctcacaatgggagacaacaccaacaatctcgac
tctatcgaatccggcacatcctactacagcgacaaacaatcctcaaccacgtcctcttcc
aacactaaaaaaattgacgaagaagaatccgccctctccaaagaaatccaccgcaccatg
tccacaatgaccgaactaatcaataccaaaatggcaccctgtgccgaacgcactggacga
agtcagcattcattattggtcaagcgatatcgtgagattttgtttgattgcggtgccgat
tttaaaaagactagtgccggtgtggcacggaggagggaggcgatggagttgtttcgcgga
agtaatgataacaaaggagagaatgggacagatccagcaatggaacaattgttacgtgaa
cgaaatgcaatcgacaattccatgaagtcggcatcgtcggtgttgaatcaagcatcgagt
gtacgatccgaattacgaagtcagggagcgagtttgaggggagtggggggtactatggcg
agtattgcgggaaatataccgggggtgaataatttgattgagaggattcggcagaagagg
atgagggatgataaggttgtcggtggggttgtggcggggtgtattttatttacgctttgg
tatttgtttgggtga
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