Thalassiosira pseudonana: THAPSDRAFT_bd96
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Entry
THAPSDRAFT_bd96 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03251
translation initiation factor 3 subunit D
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tps03012
]
THAPSDRAFT_bd96
Translation factors [BR:
tps03012
]
Eukaryotic type
Initiation factors
eIF-3
THAPSDRAFT_bd96
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3_zeta
NARG2_C
IspD
Motif
Other DBs
NCBI-GeneID:
7444438
NCBI-ProteinID:
XP_002297246
JGI:
bd96
UniProt:
B8LDZ2
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
QASVSVRPDWRRVEEVDLSKLSKGTSPLSGMVDNSPPKKVEDLAWCGFLDQYNDQYDKVS
TRTPAPLKRIENKEFYPVTTTDDPVIEKLAIEGKGTVFATDAILAHLMTCPRSVYPWDVV
VQKLPTGALFFDKRDASQFDYLTVHETSNTPPAPVNERDNINENDNEALMNTPERLSLEA
TMINQNFTQQILRSSKYRSKMDLPNPFWDEEDNDGMEPASVAYRYRKFDLGDGIELVART
ELHGLAKKKGNQYMTAYALNEYDPSYAANAPPARPGTSINWREKIDNQAGAVLASELKNN
SFKLAKWTAQSLLAGASQMKIGFVSRINPKNAYEHTILATQSYRPMDFATQITLNQGTMW
GIMRLFIKLLEDQPEGKYVIMRDPNRAIVRIYGVPVGTFESD
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
caggcatccgtctcggttcgtcccgattggcgtcgcgtggaggaggtggatttgtccaag
ttgtccaagggcacgtctcctcttagtgggatggtggataactctcctcccaagaaggtg
gaggatttggcatggtgtggtttcctcgatcagtataatgatcagtatgataaggtgtcc
acgaggactcctgctcctttgaagcgtattgagaacaaggagttttaccccgtcaccacc
acggatgatccggtcattgagaagttggccattgaaggaaaggggacagtctttgccacg
gatgccattttggctcatttaatgacatgtcctcgttccgtgtatccgtgggatgttgtc
gttcaaaagctacccactggtgccttgttctttgacaagcgtgacgccagtcagtttgac
tacttgactgttcatgagacgtccaatactcctcctgcaccggtcaacgaacgtgataac
atcaacgagaatgacaatgaggccttgatgaatactcctgaaaggttgagtttggaggct
actatgatcaatcaaaactttactcagcagatcttgaggagttccaagtatcgatccaag
atggacttgcctaaccccttctgggacgaggaggataatgatggaatggaaccagcgagt
gttgcataccgttaccgaaagtttgatttgggtgatggaattgaactcgtcgctcgtacc
gagttgcacggtcttgccaagaagaagggaaatcaatacatgactgcttatgcattgaac
gagtacgatccatcgtatgctgccaatgccccaccggctcgtcctggaacttccatcaat
tggcgtgaaaagattgataaccaggctggagcagtccttgcgagtgaactcaagaataat
tccttcaaacttgccaagtggacggctcagtcgttgttggcgggggcgtctcagatgaag
attgggtttgtatctcgtatcaaccccaagaatgcctacgagcatactattttggctacg
caatcgtatcgtcctatggattttgctacgcaaattacgttgaatcagggtaccatgtgg
gggattatgaggttgtttatcaagttgttggaggatcagccggagggcaagtatgtgatt
atgagggatccgaatagggctattgtaaggatttatggtgtgcctgttgggacttttgag
agtgat
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