Thalassiosira pseudonana: THAPS_10946
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Entry
THAPS_10946 CDS
T01078
Name
(RefSeq) predicted protein
KO
K24940
CWF19-like protein 2
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tps03041
]
THAPS_10946
Spliceosome [BR:
tps03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
THAPS_10946
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CwfJ_C_2
CwfJ_C_1
Motif
Other DBs
NCBI-GeneID:
7444787
NCBI-ProteinID:
XP_002295599
JGI:
10946
UniProt:
B5YLY9
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Position
18:complement(509161..510732)
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AA seq
523 aa
AA seq
DB search
MLSGIKTGKRKRPAATAKPAGDVGVASQPQPSAAASHQDASYATAAVGASASASNQSAAD
ALRASLLSSPTYTPSSENDSTDWKLDGIQSRINARASSHKNNEASINNLESRGRISHDTI
AAHKVDGTIVIGSTSASATQQQTNDNNALRYNTKGKLSKHAHTQLRQQTDASLTIEEMAA
QERSSSSNNMDEIYARNIQRMGKGYKKYDKTSNNNSRSGADEEDYLQESSILSDLYRSGE
DKLSAKEIEHREKSKQIARHDALGKWTAKSWWWMESPSFEKRYLISLGEKVSMVMVPSHK
CLQQRKGWGGQCYLVPLQYSESFVGVDEEVWYEVQRFQHCLRQMFHKEGRGVLFLETVTR
TSRGGGGGAALQAKMEIVPVPMSVERDAPLYFKSALAEMAQEWGTHGKKGCVTLDGSKKT
LRNAVPKGFPYFYCGWEGGGFVQLIEQEEGGDDDGNGGGGLRGLSGGDSRGFRDFGIDTI
AGMMELDPIRFQKKQPAKDGDRAVILAFCDKWKEFDWTLELDG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgctctccggaatcaagacaggcaagcgcaagagacctgccgccaccgctaaaccagcc
ggtgacgtcggcgttgcctcgcagccacagccgtcggcggcggcctcgcatcaggatgca
tcctacgccactgccgctgtcggtgcatcagcgtcagcctccaatcaatctgccgccgat
gcccttcgcgcaagcctactatcctctcccacgtacacaccctccagcgagaatgactca
accgattggaaactagacggtattcaatcaagaatcaatgcacgtgcctcttcgcacaaa
aacaacgaggcttcgattaacaacctagaaagtcgcgggaggatatcacacgatactatc
gccgctcataaagttgatggcactattgtcatcggctcaacctccgcttcagcaacgcaa
caacaaacgaacgacaacaatgcactgcgttacaacacaaaagggaaactgtccaaacac
gctcacacccaactccgtcaacaaaccgacgcttccctcaccattgaagaaatggcagct
caagaacgcagctcttcctccaacaacatggatgaaatatacgcgcgtaatatccaacgc
atgggaaagggatacaaaaagtacgacaaaacatccaacaacaattcacgctccggtgcc
gacgaggaagattacctacaagaatctagcatactctcggatctgtatcgtagtggagaa
gacaaattgtccgcgaaggagattgaacatcgcgagaaatcaaaacagattgcacgtcat
gatgctttggggaaatggaccgccaagagttggtggtggatggagagtccttcttttgag
aagcggtatttgatttcgttgggagagaaggttagcatggttatggttccgagtcataag
tgtttgcagcaacgaaaggggtggggaggacaatgttatcttgttccattgcagtattca
gagtcgtttgtgggagtggatgaagaagtgtggtatgaagtacagaggtttcagcattgt
ttgaggcaaatgtttcataaggagggaaggggggtgttgtttttagagactgtgactcgt
acttctcgcggtggaggtggtggagccgcgctgcaagccaagatggagattgtaccggtg
ccaatgtcggtggaacgagatgcaccgttgtatttcaagagtgcattggcagaaatggcc
caagagtggggaactcacgggaagaaaggatgtgttacgttagatggaagtaaaaagact
ttgaggaatgccgttccaaagggatttccgtacttttattgtggatgggagggaggaggt
ttcgtacaacttattgaacaagaggagggtggagatgatgatggaaatggaggtggcggg
ttgagagggttgagtggaggtgattccagggggtttagggactttggaattgatactatt
gcggggatgatggagttggatccgattaggtttcagaagaagcaacctgccaaagatgga
gatcgtgctgtgattctggctttttgtgataagtggaaggagtttgattggactttagag
ttggatggttag
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