Thalassiosira pseudonana: THAPS_10979
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Entry
THAPS_10979 CDS
T01078
Name
(RefSeq) predicted protein
KO
K00565
mRNA (guanine-N7-)-methyltransferase [EC:
2.1.1.56
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
THAPS_10979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tps03019
]
THAPS_10979
Enzymes [BR:
tps01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.56 mRNA (guanine-N7)-methyltransferase
THAPS_10979
Messenger RNA biogenesis [BR:
tps03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
THAPS_10979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_G-N7_MeTrfase
Methyltransf_12
Methyltransf_31
Methyltransf_23
Methyltransf_25
FtsJ
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
7443021
NCBI-ProteinID:
XP_002295618
JGI:
10979
UniProt:
B5YM23
LinkDB
All DBs
Position
18:complement(612122..614611)
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AA seq
829 aa
AA seq
DB search
MSSYPKATPIAKHDLLCLSTILNPILHKQPSTNNPPAISTIDSLTSALVKSSLPQATTAD
LLRLATVYTYKDAPVHPKPLSRAPRIESLMDWSLFVRATCVVGHGGNFGSNGGGDGALLK
QCAIAVKLPSTIPTNSDDPKTQKDIKNSSLFRDFMKHLYDNKLVAVLACDSSGRIGFVVP
LLLLSGNNGGGEDEYYAANLYYAPMKEFVKWARDNYSKSLQEGEESSSSQYRGQQSTDSG
EVGTWTPQYSPPPETECGPSNEWDNVKMDTDDDGANNNDSMAAEELGTWTPQYTPPPEKE
CVPCGWEEAEIGNKNVNVGVDDDNDGLFVPAVASSNHDGGGFGNKDHEIGAGLWGWNDNT
ATDNGTATGWDNANETNNDETGLGGWTSVSNAETKTDGVFHANAGAAAADAFYSGLTRSL
DTRADSRLYHMRAFNGWVKATQIAELDPDTFAASSTSGGRKRSRRSPMRVLDLACGKGGD
LGKWTLHQRGVENYVGVDVARGSLVDAAVRARQMTKKGRGNALKRCTFTLADLGEDVPGR
KRSKNAKRMQELLSWNMQSETSEDQRYDPKFAAIEGGGISESDKFDVVSIQFAIHYMMST
RKRARRFFHTVSSLLEVGGNLIATTIDARVVVEKLMALGKDYHFDEMDLHSEVDKAENEE
RHNNGNKHRKVTSVEGATVKVGKGVCRLKFDEEILRKVFHPPKTPEDMFGLQYTFTLVEG
SDHAAGIGEAVDLPEWLTPIPALKELAHEAGLELEYATNFHAFYEERKNPAQHPAAHNAL
YNMKVLNRDGSISEQEWEVSRMYIALKFRKVRESTIELGEEGVGEDEMK
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttaccccaaagccacacccatcgcaaaacacgacctcctctgtctatccacc
atactcaaccccatcctccacaaacaaccatccaccaacaatccacccgcaatctctaca
atcgactcattgacatcggcattggtcaaatcatcactaccacaagcaactactgcagat
ctactacgtcttgcaacagtgtacacctacaaagatgctcccgtgcatccaaaaccatta
agccgtgctccgaggattgagagtttgatggattggagtttatttgtgcgtgccacttgt
gtcgtcggacatggggggaactttggcagtaatggtggtggtgacggtgcgttattgaag
caatgtgcaatagcagtgaaacttccatccacaataccgaccaactcagacgatccaaaa
actcaaaaggatatcaagaactcgtccctctttcgtgactttatgaagcatttatatgac
aacaagttggttgcggtactggcgtgcgattcttctggtagaattggcttcgtcgttccg
ttactgttgttgagtggcaataatggcggaggggaggatgagtattatgcggctaatttg
tactatgcaccgatgaaggagtttgtaaagtgggcacgtgacaattattccaagtcgttg
caagaaggagaggaatcatcgtcatctcaatatcgtggtcaacaatcgacagacagtgga
gaagtaggaacgtggacaccgcagtatagtcctcctcccgaaacagaatgtggtccatcg
aatgaatgggataatgtcaaaatggacacagacgatgatggagcaaacaataatgatagt
atggcagcggaagagttgggaacatggactccacagtacactcctccaccggaaaaggaa
tgtgtcccttgtggctgggaagaggcggagattggaaacaagaatgtaaatgtgggtgta
gatgatgataatgatgggttgtttgtaccagctgttgcttcctccaatcatgatggaggg
ggatttgggaacaaagaccatgaaataggtgctgggttgtggggatggaatgacaatact
gcaactgacaatggtacagctaccggatgggataacgcaaacgaaacaaataacgatgaa
acgggcttgggcggatggacgagcgtaagcaacgctgaaacaaagaccgatggagtattc
cacgccaacgcaggagccgcagcagccgatgccttttactctggcctcactcgttcattg
gatacacgtgccgattcacgattgtatcacatgcgagcattcaatggatgggtcaaggct
actcagattgccgaattggatcctgatacgtttgctgcatcttccacttctggtgggagg
aaacgatcgaggagatcgccgatgcgtgtgttggacttggcctgtggaaagggaggtgat
ttgggaaagtggacgttgcatcaacggggggtggagaactatgtgggtgtggacgtagcc
agaggatcacttgtggatgctgcggttcgtgcacgacaaatgaccaagaaggggagaggg
aatgcattaaagcgttgtacgttcaccttggctgatttgggagaggatgtgccggggagg
aaacgatccaaaaatgccaagaggatgcaagagttgctctcttggaatatgcagtctgaa
acgtcagaggatcaacgttatgatccaaagtttgctgctattgaaggaggagggatatca
gagtcagacaagtttgacgtggtcagtattcaatttgcgattcactacatgatgtcaaca
aggaagcgtgctcgccgattctttcataccgtgagcagtttgttggaagttggtggtaac
ttgatcgccacgacgattgatgctagagtggtggttgagaaactaatggctttgggtaag
gattatcattttgatgagatggatttgcattcagaggtggacaaggcagagaatgaagaa
cggcacaacaacggcaacaaacacagaaaggttacgagtgtggaaggagcaacagtcaaa
gttggcaaaggagtctgtcgcctcaagtttgacgaagaaatacttcgcaaagtctttcat
ccaccaaagacacccgaagacatgtttggactccaatacactttcactctcgttgaagga
tccgaccatgcagccggaataggagaagcagtcgatctaccagagtggctgactcccatt
cctgccttgaaagagctggcacacgaagctggcttggaattggaatacgccacaaatttt
catgcattctacgaagagaggaagaatccagcgcagcatccagcggctcacaacgctctt
tacaatatgaaggtactaaatagagacgggtcaatatcagagcaggagtgggaagtgagt
aggatgtacattgctctcaagtttcggaaggtgagagagtcgacaattgagctaggcgag
gagggtgtcggcgaggatgaaatgaagtag
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