Thalassiosira pseudonana: THAPS_17271
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Entry
THAPS_17271 CDS
T01078
Name
(RefSeq) predicted protein
KO
K14864
tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:
2.1.1.205
]
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tps03016
]
THAPS_17271
Enzymes [BR:
tps01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.205 tRNA (cytidine32/guanosine34-2'-O)-methyltransferase
THAPS_17271
Transfer RNA biogenesis [BR:
tps03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
THAPS_17271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Motif
Other DBs
NCBI-GeneID:
7444812
NCBI-ProteinID:
XP_002295463
JGI:
17271
UniProt:
B5YM32
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All DBs
Position
18:630970..631887
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AA seq
221 aa
AA seq
DB search
MGRLSRDKRDVFYRKAKETGYRARSAFKLIQIDNEFDLLVHRAVDLCAAPGGWSQVLVER
IVPQDAVAKTEASTKDKLNGASGENIGTPAIVAVDLWPMEPLPGVHCIQGDITSLETAQK
IIQHFHGRRAELVVCDGAPDVTNLHSFDSYTQSQLLLSAINISTHVLSPNGIFVAKIFRG
RDVGLIYTQLQLLFENVVCAKPTASRNASIESFVVCRGFGY
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgggacggctctcccgagacaaacgcgacgtcttctaccgcaaggcaaaagaaacagga
tacagagctcgcagtgcctttaagttgatccaaattgacaatgagtttgacttgcttgtt
catagagcagtagacctatgtgcagctccgggtggctggtcgcaggtgcttgtggagcga
atcgtgccacaagatgcagttgcaaaaactgaggcatcaacgaaagataaactcaatggc
gccagtggcgaaaatataggaacgccagcgattgttgcggtggatctgtggccaatggag
ccattgcccggagttcattgtatacaaggtgacatcacttcgctcgaaactgctcagaag
atcattcaacactttcacggaagacgtgcagagctagtagtatgtgacggggcaccagac
gtaaccaacctacactccttcgattcctacactcaatcccaactcctcctctccgccatc
aacatatccactcacgtcctatctcccaacggtatctttgttgccaaaatttttcgagga
cgagatgtaggattgatttacactcaattacagttactgtttgagaatgtagtgtgtgcc
aagcctaccgcgagtaggaatgctagtattgaatccttcgtcgtatgccgagggtttggg
tat
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