Thalassiosira pseudonana: THAPS_20268
Help
Entry
THAPS_20268 CDS
T01078
Name
(RefSeq) predicted protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
tps
Thalassiosira pseudonana
Pathway
tps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THAPS_20268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tps03019
]
THAPS_20268
Messenger RNA biogenesis [BR:
tps03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
THAPS_20268
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
THAPS_20268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
7444263
NCBI-ProteinID:
XP_002295562
JGI:
20268
UniProt:
B5YLR3
LinkDB
All DBs
Position
18:complement(342234..342461)
Genome browser
AA seq
76 aa
AA seq
DB search
KFQLETLFYIFYALPKDVLQAYAAQELYTREWRYHVESKVWFKRATASDGIPNNNASAGQ
FIYFDINTWERRMYGN
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
aaatttcagctggaaactctcttctacatcttctatgctcttccaaaagacgtgttacaa
gcgtacgcagctcaggagctgtacacgagggagtggaggtaccatgttgagtcaaaggtg
tggttcaagcgggcaacggcatcggatggaattcctaacaacaatgcgtcggcgggtcag
ttcatctactttgatatcaacacatgggaacgtcggatgtatggcaat
DBGET
integrated database retrieval system