KEGG   Thalassiosira pseudonana: THAPS_20268
Entry
THAPS_20268       CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K12605  CCR4-NOT transcription complex subunit 2
Organism
tps  Thalassiosira pseudonana
Pathway
tps03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    THAPS_20268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tps03019]
    THAPS_20268
Messenger RNA biogenesis [BR:tps03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     THAPS_20268
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     THAPS_20268
SSDB
Motif
Pfam: NOT2_3_5_C
Other DBs
NCBI-GeneID: 7444263
NCBI-ProteinID: XP_002295562
JGI: 20268
UniProt: B5YLR3
LinkDB
Position
18:complement(342234..342461)
AA seq 76 aa
KFQLETLFYIFYALPKDVLQAYAAQELYTREWRYHVESKVWFKRATASDGIPNNNASAGQ
FIYFDINTWERRMYGN
NT seq 228 nt   +upstreamnt  +downstreamnt
aaatttcagctggaaactctcttctacatcttctatgctcttccaaaagacgtgttacaa
gcgtacgcagctcaggagctgtacacgagggagtggaggtaccatgttgagtcaaaggtg
tggttcaagcgggcaacggcatcggatggaattcctaacaacaatgcgtcggcgggtcag
ttcatctactttgatatcaacacatgggaacgtcggatgtatggcaat

DBGET integrated database retrieval system