Thalassiosira pseudonana: THAPS_23528
Help
Entry
THAPS_23528 CDS
T01078
Name
(RefSeq) rab-type small GTPase
KO
K07905
Ras-related protein Rab-11B
Organism
tps
Thalassiosira pseudonana
Pathway
tps04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
THAPS_23528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPS_23528
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tps04147
]
THAPS_23528
04031 GTP-binding proteins [BR:
tps04031
]
THAPS_23528
Membrane trafficking [BR:
tps04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
THAPS_23528
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
THAPS_23528
Exosomal proteins of other body fluids (saliva and urine)
THAPS_23528
Exosomal proteins of colorectal cancer cells
THAPS_23528
GTP-binding proteins [BR:
tps04031
]
Small (monomeric) G-proteins
Rab Family
Rab11/25 [OT]
THAPS_23528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
RsgA_GTPase
PduV-EutP
FeoB_N
AAA_22
ABC_tran
Gtr1_RagA
AAA_16
TniB
NTPase_1
AAA_14
AAA_24
AAA_5
AAA_7
MCM
AAA_21
Motif
Other DBs
NCBI-GeneID:
7450667
NCBI-ProteinID:
XP_002296252
JGI:
23528
UniProt:
B5YND5
LinkDB
All DBs
Position
7:complement(1306250..1307719)
Genome browser
AA seq
215 aa
AA seq
DB search
MATRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKT
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVV
MLVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRR
NMAAEDGANAPQLSSGQTISLNAENKPRRNCCNNA
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccagagcagacgaagaatacgactacctctttaaagtagtcctcattggagat
tccggagtaggaaagtccaacttgctatcccgattcacccgtaatgaattcaacctcgag
tccaagtctaccattggggtagagtttgctaccaagtcgattcagacggagggcaagact
atcaaggctcagatttgggatactgctggacaggagaggtacagggctattacttctgct
tattacagaggagcagtaggagcattgctggtgtacgacatctccaaacacggcacattc
gaaaacgtcgaacgctggctcaaagaactccgcgaccacgccgaagccaacatcgtcgtc
atgctcgtcggaaacaaatctgatctccgtcacttacgcgcggtggaaacagacgaggcc
atggccttcagcgagcagcacaaccttgcctttattgagacttcggcccttgatgcttcg
ggtgtagatactgcgtttcagaggattttgacagaaatttatcgtctcatgtctcgtcgt
aatatggctgcggaggatggagcgaatgcacctcagttgtcgagtgggcagactatcagt
ttgaatgctgagaataaaccccgaaggaattgttgcaacaacgcttaa
DBGET
integrated database retrieval system