KEGG   Thalassiosira pseudonana: THAPS_23528
Entry
THAPS_23528       CDS       T01078                                 
Name
(RefSeq) rab-type small GTPase
  KO
K07905  Ras-related protein Rab-11B
Organism
tps  Thalassiosira pseudonana
Pathway
tps04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:tps00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    THAPS_23528
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tps04131]
    THAPS_23528
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tps04147]
    THAPS_23528
   04031 GTP-binding proteins [BR:tps04031]
    THAPS_23528
Membrane trafficking [BR:tps04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    THAPS_23528
Exosome [BR:tps04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   THAPS_23528
  Exosomal proteins of other body fluids (saliva and urine)
   THAPS_23528
  Exosomal proteins of colorectal cancer cells
   THAPS_23528
GTP-binding proteins [BR:tps04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    THAPS_23528
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase PduV-EutP FeoB_N AAA_22 ABC_tran Gtr1_RagA AAA_16 TniB NTPase_1 AAA_14 AAA_24 AAA_5 AAA_7 MCM AAA_21
Other DBs
NCBI-GeneID: 7450667
NCBI-ProteinID: XP_002296252
JGI: 23528
UniProt: B5YND5
LinkDB
Position
7:complement(1306250..1307719)
AA seq 215 aa
MATRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKT
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVV
MLVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRR
NMAAEDGANAPQLSSGQTISLNAENKPRRNCCNNA
NT seq 648 nt   +upstreamnt  +downstreamnt
atggcaaccagagcagacgaagaatacgactacctctttaaagtagtcctcattggagat
tccggagtaggaaagtccaacttgctatcccgattcacccgtaatgaattcaacctcgag
tccaagtctaccattggggtagagtttgctaccaagtcgattcagacggagggcaagact
atcaaggctcagatttgggatactgctggacaggagaggtacagggctattacttctgct
tattacagaggagcagtaggagcattgctggtgtacgacatctccaaacacggcacattc
gaaaacgtcgaacgctggctcaaagaactccgcgaccacgccgaagccaacatcgtcgtc
atgctcgtcggaaacaaatctgatctccgtcacttacgcgcggtggaaacagacgaggcc
atggccttcagcgagcagcacaaccttgcctttattgagacttcggcccttgatgcttcg
ggtgtagatactgcgtttcagaggattttgacagaaatttatcgtctcatgtctcgtcgt
aatatggctgcggaggatggagcgaatgcacctcagttgtcgagtgggcagactatcagt
ttgaatgctgagaataaaccccgaaggaattgttgcaacaacgcttaa

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