Thalassiosira pseudonana: THAPS_23630
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Entry
THAPS_23630 CDS
T01078
Name
(RefSeq) predicted protein
KO
K12183
ESCRT-I complex subunit TSG101
Organism
tps
Thalassiosira pseudonana
Pathway
tps03250
Viral life cycle - HIV-1
tps03272
Virion - Hepatitis viruses
tps04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
THAPS_23630
03272 Virion - Hepatitis viruses
THAPS_23630
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
THAPS_23630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPS_23630
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tps04147
]
THAPS_23630
Membrane trafficking [BR:
tps04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
THAPS_23630
Exosome [BR:
tps04147
]
Exosomal proteins
Proteins found in most exosomes
THAPS_23630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
Vps23_core
UQ_con
DUF3744
DUF7906
Motif
Other DBs
NCBI-GeneID:
7447204
NCBI-ProteinID:
XP_002296344
JGI:
23630
UniProt:
B5YNX5
LinkDB
All DBs
Position
7:complement(1855449..1857432)
Genome browser
AA seq
437 aa
AA seq
DB search
MNCMPSDNLSNLIHRLSGVYRDPQRVLRDAETLLNSPLGHHLRPTTEPLMLNDGTSTPPV
LMLSGTLPMTYRGVTYNLPIDMYLPPPYPLRPPTVFVRPVASMAIKENHRHVGLDGKVYL
PYLHEWRPQSHDLRELAVWMSSTFGDEPPCYAKPANQSGGGGGGRSNPPPYAQASVTSAY
NPNAVSNSVRASVVSTSTILSNSMNSEEEQRRIAFEKEIAEANLAAETARKAAAEEARLE
EESKRLKLEHDANLSNMRAMATSKVQFQIQQIFKESKEEMRRELKDQKLLEVGKERIDML
LKEGEEQKNGLIRDIAEMDKAVEELEQWLEAVEEQKRNTGEDASSSEQQQQQRQQNVDLL
ALPTDTHSAQMLELSAKNAAIDDCIYYLDRALVRGSITLDVFLKEVRKLSKEQFLAKAHL
LKIAQAKFGTDIRSNQV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaactgcatgccatccgacaatctctccaacctaatccatcgcctctccggcgtatac
cgcgacccccaacgagtcctccgcgacgccgaaaccctcctcaactcaccactcggccat
cacctccgtcccaccaccgaaccactcatgctcaacgatggtacttccactccacccgtg
ttaatgctcagtggaactctcccaatgacgtatcgaggagtgacttacaatctaccgatt
gatatgtatttgcctccgccgtatccgttgagaccacctactgtttttgtgaggcctgtg
gcgagtatggcaatcaaggagaatcatcgtcatgtgggtttagatggaaaggtgtatttg
ccgtatttgcacgagtggaggccgcaatcgcacgatttgagagagttggctgtttggatg
agtagtacttttggggatgagcctccgtgttatgccaaacctgcaaaccagagtggtgga
gggggtgggggcaggagcaatcctcctccgtatgctcaagcgtctgtcacttcagcgtac
aatccaaatgcagtgagcaattcagtcagggcatcggttgtatcaacgtcaacgatactc
agcaatagtatgaacagcgaagaagaacagaggagaatagcctttgaaaaagagattgcc
gaagcgaatctagcagccgaaacggcacgaaaggcagccgccgaagaagctcgtctcgaa
gaagaaagcaagcgattgaagctggaacatgatgcaaatctatccaatatgagagccatg
gcgacttccaaggtgcaattccagatacagcagatattcaaagagtcaaaggaggagatg
aggagggagttgaaagatcaaaagttgttggaggttgggaaggagaggattgatatgttg
ttgaaggagggagaggaacagaaaaacggattgattcgagatattgcagagatggataag
gctgttgaggaattggagcagtggcttgaggctgtggaagagcagaaacgcaacactggt
gaagatgcctcctcaagcgaacaacaacagcagcaacgacaacagaatgtagacctccta
gccctcccaacagacacgcactccgctcaaatgctagaactcagtgcaaagaatgcagca
atcgatgactgtatctactatctggatagggcgttggtacggggtagtattacactggat
gtgtttttgaaggaggtacggaaattgagtaaagaacagttcttggccaaggctcatttg
ttgaagattgctcaggcaaagtttggaacggatataaggagcaatcaagtataa
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