Thalassiosira pseudonana: THAPS_25363
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Entry
THAPS_25363 CDS
T01078
Name
(RefSeq) predicted protein
KO
K11578
protein transport protein DSL1/ZW10
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPS_25363
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPS_25363
Membrane trafficking [BR:
tps04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
THAPS_25363
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
RZZ complex
THAPS_25363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZW10_C
ZW10_C2
Motif
Other DBs
NCBI-GeneID:
7442975
NCBI-ProteinID:
XP_002295572
JGI:
25363
UniProt:
B5YLT1
LinkDB
All DBs
Position
18:complement(382381..>385710)
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AA seq
1071 aa
AA seq
DB search
MSVEQRLHKVKRSILEATEEAYEAMVVSNETIVGNALVNAAATSDGDNRAGLDVGLALFG
TSDAYKSQMEEEFREKLSTVEKDLDLIRCGLTAVDDSLDSDDNRAPDASTDVDDSGGGYS
LQQILHVQNHVSFLMECSQARKLLDEVDTLAMTNFATSIVSSDAGGKNGGSAVFPFSPSS
SLFSPSSIANRFTFDTKDEGGDSPMVQAATLVKKVDAMLEKATHCLQESDKEYNTGNTVS
DINGVTQMQAKILNELRHQTRRKQMELRHRAITLLEGCVVFDEGKLQVRGSGTAVSDKKP
ASKSVGFLGLESSTPSSSTPGDIDTTIPPSPLSDAYQVLQLFSDAKFPSFGETLDRAMKT
LSRKFFTRVLQPCTAKLDSMLMQQHSEVGYYTFQQKSIVRSSSVVGGGIAGRKNDPVNIK
GPAVQLEWALSTLEFSSSFLGGSIINVVASAPQVNVDDLQKASPSASVATFLSSLNFLTN
YFAFVHHHVLLRRPDLASIMGKHLFGQYPVQTALSSGSAVLGGILVGSAAQGEEQGEERP
LIIELVRKMRKWCIPSESSPQAWRMVQQLQPVMSKEVAAFENMMKEMGFMDVNANSIASR
IGKSSAASSPSGLSVLVNPEMSSPIKPSANETLSNISRMEPLDLASPVAAGLSEYDETTQ
SQLSELANSFIQAYIEDQRSQILNKGRSILLCTDYHNAVKAGKFVDDPSEPGSPASLDDN
PLSPFLFPQCSISTTAQQMYNLVRKTLDDASHPNLAHELEALPPVLYRASRELLDLFRII
IPTQYASEVASIPRTAALLHNDCVFLAHEASLLGAEYKGKFNSFSSSKDADVDDNPGRQN
KMQLLSGVCTFVDSVPPFRDLATKSMGAMIELQKSQLYELVSPRLANFERALCSNESVSE
WDDAETALSAALYHLCHLSQAWSQVLSRGVYHLAMGNLVDTVFSLFLDLVLTAEAITDPA
SRFVHSLFLDAARGAAEMFLVGAPTSDVTMSMDTQQNMDERFKIAHKYATLFDKLNAIGQ
FMIMRLDDVQRGLEEGLFRSVKAKELAHLVDATFDESDKRKSLLKALAATK
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgaacagcgcctccacaaagtcaaacgcagcatcctcgaggccactgaagaa
gcctatgaggccatggttgtttcgaacgagaccatagtgggaaatgctctggtgaacgcc
gcagccacatctgacggagacaatcgagcaggccttgacgttggactggctctctttggc
acttcggatgcgtacaaaagtcaaatggaagaggagtttcgtgagaagctgtcaactgtg
gagaaagatctggatctcattcgctgtgggctaacggctgtcgacgacagtttagacagc
gatgacaatcgtgctcctgacgcatcaaccgatgttgacgatagtggcggtggctattct
ctgcagcaaatactgcatgtgcagaatcatgtgagctttttgatggagtgttcacaagct
cggaagctgcttgacgaagtagacacgcttgcaatgaccaactttgccaccagcattgta
agcagcgatgctggcggcaaaaatgggggctctgcggtatttccattctctccctcaagc
agcctcttcagtcccagctccattgccaatcgtttcacttttgatacgaaagatgagggg
ggagactcgccaatggtgcaggctgcaacgttggtcaagaaggtcgacgctatgttggag
aaggcaacgcattgtttgcaggagtctgacaaggaatataacaccggcaacactgtgtca
gacatcaatggtgtaactcagatgcaggccaaaattctcaatgaattgcgacaccaaaca
cgtcgtaagcagatggaactccgtcatcgtgccatcactctcttggaggggtgtgttgtt
tttgatgaaggcaaactccaggtcaggggaagtggaactgctgtttcagataaaaagcct
gcttcgaaatcggttgggtttcttggtcttgaatcttccacgccatcgtcatctacaccc
ggtgacattgatacaacaattccaccctcgccgttatcggacgcctatcaagtcctccag
ctattctctgatgctaaatttccctcttttggtgaaacgttggacagggctatgaagact
ttatctcggaaattcttcactcgggtgttgcagccctgcacggcaaagttggactcgatg
ttgatgcaacaacacagtgaggttggttactacacgtttcagcagaagtccatcgttcgg
tcttcttccgttgttggtggtggtatagctgggcgcaaaaatgatcctgtgaatatcaag
gggcctgccgttcaattggaatgggctttgtccacgttagagttttcctcatcatttctt
ggcggaagtatcatcaatgttgttgcttctgctcctcaagtgaacgtggatgaccttcaa
aaagcatcgccgtcagcctccgttgccaccttcctctcctccctcaactttctgaccaac
tatttcgccttcgtccaccaccacgtactccttcgccggcctgaccttgccagcattatg
ggcaaacatcttttcggtcaatatcctgtgcagactgccctatcctccggatctgcagtg
ctgggggggattttggtaggttctgcagcacaaggagaagaacaaggtgaagagcgaccg
ttgatcattgagttggtgaggaagatgagaaagtggtgtattccaagcgagagttcgccg
caggcttggagaatggtacaacagcttcaaccggtaatgagcaaagaggtcgctgcattt
gagaatatgatgaaggagatgggatttatggatgtcaatgcgaatagtattgcctcgcgg
ataggtaaatcatcggcagcgtcgtcaccgtcgggtttgtctgtgttagtgaatcccgag
atgagttctccgatcaaaccaagtgcaaatgagaccttgtccaacatttcacggatggaa
ccacttgaccttgcctcgccagtggcggctggcctcagtgaatacgacgaaacaacccag
tcacaactgtcagaattggcaaactccttcatccaagcatacattgaggaccaacgctcc
cagatcctcaataaaggccgatccatcctcctctgcaccgattaccacaacgccgtcaag
gctggaaaatttgttgacgacccttccgaacctggttcacctgcttcattggacgacaat
cccctgtctcctttcctcttcccgcaatgttctatcagcacgacagctcagcaaatgtac
aacctcgtgcgaaaaacgcttgacgacgcatctcatccaaacttggcccacgagctcgaa
gcccttccgcctgtgttgtaccgtgcctcacgtgagttgcttgatttattcaggatcatc
attccgacgcagtatgcgagtgaagttgcaagcattccgaggacggctgcgttgctgcac
aacgattgtgtgtttttggcacatgaagcgtcattattaggagccgagtacaagggcaaa
ttcaacagcttcagttcgtccaaggacgctgatgtggatgacaatccaggaagacaaaac
aaaatgcagttgttatctggagtctgtacctttgttgattctgttccgccatttagggac
cttgctaccaagtctatgggggcaatgattgagttgcaaaagagtcagttgtatgaatta
gtctctccacgtcttgcaaattttgaaagggccctttgttcgaacgagtcggtttcagag
tgggatgacgcagagactgctctctcagctgctctttaccatttatgtcacctctcacag
gcttggagtcaagtgctttctcgcggcgtgtatcatttggcaatggggaatttggttgat
accgtcttttctctgttccttgaccttgttttgactgcagaagcaattactgatccagcg
tcgaggtttgtacattcgctttttctggatgcagcaagaggagcagcagagatgttcctc
gttggagcacctacatctgacgtgacaatgtcaatggatactcaacaaaacatggacgag
cgattcaaaattgcccacaaatacgcgacactgtttgataagttgaatgcgattggtcag
ttcatgatcatgaggcttgatgatgtccagcgaggtttggaggaggggttgttccgtagc
gtcaaagccaaagagctagcacatctcgtggatgcgacgttcgatgaaagcgacaaacgc
aaatccttgttgaaggcgttggctgctaccaagtga
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