Thalassiosira pseudonana: THAPS_263089
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Entry
THAPS_263089 CDS
T01078
Symbol
BRAC2
Name
(RefSeq) breast cancer 2 early onset
KO
K08775
breast cancer 2 susceptibility protein
Organism
tps
Thalassiosira pseudonana
Pathway
tps03440
Homologous recombination
tps03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
THAPS_263089 (BRAC2)
03460 Fanconi anemia pathway
THAPS_263089 (BRAC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tps04121
]
THAPS_263089 (BRAC2)
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPS_263089 (BRAC2)
03400 DNA repair and recombination proteins [BR:
tps03400
]
THAPS_263089 (BRAC2)
Ubiquitin system [BR:
tps04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
THAPS_263089 (BRAC2)
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
THAPS_263089 (BRAC2)
DNA repair and recombination proteins [BR:
tps03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
THAPS_263089 (BRAC2)
FA (Fanconi anemia) pathway
Downstream FA components
THAPS_263089 (BRAC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
7448960
NCBI-ProteinID:
XP_002295730
JGI:
263089
UniProt:
B5YME7
LinkDB
All DBs
Position
7:427471..428442
Genome browser
AA seq
323 aa
AA seq
DB search
GCDDSLFSDKWIGNHYRWIVWKLAAMERRFPHHLGGHYLTYERVLKQMKGRYDKELRNFR
RPAVRIMLNRDVAASLPVILCVSQILRFKSRPPKGSSSDEIKEEVRLELTDGWYSLPAVV
DEILLKFVEERRIAVGSKLMICNGQLVGSDDGVEPLDDSYSSSKRDCPLLLGISANNSRL
ARWDATLGFVPRNNSNLYGGNLLVKSLQDIFIGGGTVPAIDLVVCKKYPRMFLEQLNGGA
SIHLTEAEEAARQSEYDSRHQRASERYADDATKECSEVSSLLFTFFTMKPLPLLWYNLVT
DSSFGVHDSHRKSMRMLLLSGKR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gggtgcgacgattcattgttttcggacaagtggataggcaaccactaccggtggattgtc
tggaagctagcagcaatggagagacggtttccacaccatcttggaggacattacttgacg
tacgagcgtgtgctgaaacaaatgaagggccgctacgataaggaacttcgtaatttcaga
cggcctgcagtacgcataatgctcaaccgagatgttgcagcgagtttgccagtcatctta
tgcgtaagccaaatccttcgattcaaatcaagaccgccaaaaggaagttcttccgacgag
atcaaagaagaagtccgactggagttgacggatggatggtactcactacctgctgtagtg
gacgaaatactgttgaagtttgttgaagaaaggagaatcgcagtgggatcaaaactaatg
atttgcaatgggcagttagttggatctgatgacggagtggagcctctcgatgacagctac
tcatcttccaaacgagattgtcctctattgctgggcatctctgccaacaactcccgttta
gcaagatgggatgcaactctaggttttgtacctcgcaacaactctaatctatacggcggc
aatcttttggtcaaatccctgcaagacattttcatcggcggaggtactgttccggctatt
gatttggttgtttgtaagaagtacccaaggatgtttctagagcaattaaacggtggagct
tccattcatcttacagaagccgaagaagcagcacgccaaagtgagtacgattcaaggcat
cagcgagcaagcgagagatatgccgacgatgctacgaaggaatgttcagaggtaagttca
ttgctgttcacattcttcactatgaagccacttccgttgctttggtacaatcttgtcact
gactcatcttttggcgttcatgattcgcacaggaaatcgatgaggatgctcctactcagt
ggaaagagatga
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