Thalassiosira pseudonana: THAPS_263297
Help
Entry
THAPS_263297 CDS
T01078
Name
(RefSeq) predicted protein
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00520
Amino sugar and nucleotide sugar metabolism
tps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
THAPS_263297
Enzymes [BR:
tps01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
THAPS_263297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
Motif
Other DBs
NCBI-GeneID:
7450609
NCBI-ProteinID:
XP_002296343
JGI:
263297
UniProt:
B5YNX4
LinkDB
All DBs
Position
7:complement(1849762..1851046)
Genome browser
AA seq
344 aa
AA seq
DB search
VGYWQSWSVRNDTCNPFTPEHIDASSYTHIVYSFAAISDSGTLEAWDFEEDIKGGLYQDF
LAVKDRYPDVKLILAVGGWTHNDPDNERLYRFSNTASTATGRMKFAQSSVAFLRKYGFDG
LDLDWEYPGDETRGGNATLDRDNYVLLCNELRQYFDEAPEKYELSVAIPASLWYLEMGGF
DLENLAKSADYFNVMAYDLHGVWDDPPIVGAHSDIGLINSAIEYMLTNQSVPASQLVLGM
PAYGRSYTMANDTCLSLGCPFHEDSNETAIGGCLDTTGFIPYVEIFHWEKDAEYESISVD
AASYSAVMVKDGDQLISYDNKETFKSKVDYAAKKCLGGTMVWAI
NT seq
1034 nt
NT seq
+upstream
nt +downstream
nt
gtcggatactggcaaagttggagtgtccggaatgatacgtgcaatccttttacaccagaa
cacattgatgcatcatcatacacccatattgtgtattcctttgcagctatatcggacagt
ggtactctcgaagcttgggatttcgaagaagatatcaaaggaggtctctatcaagacttc
ttggccgtgaaagatagatatccagacgtcaaactcattctggctgttggtggatggaca
cacaatgaccctgacaacgaacgcctttacagattcagcaatactgcatctactgctacg
ggtagaatgaagtttgcccaaagttcagttgcatttctgagaaagtatggttttgatggt
ctcgatcttgattgggagtatcccggagacgaaactagaggtggcaatgcaacgttggac
agagataattacgtccttctttgcaacgagcttcgccaatacttcgacgaagcccccgag
aagtacgagttgagtgttgcaattcctgcatcactctggtacctagaaatgggtggcttt
gatctagagaatctagccaagtctgcagactatttcaacgtcatggcttacgacctccac
ggtgtatgggacgatcctccgattgtgggagctcacagtgacatcgggttgatcaacagt
gctatcgaatatatgctgaccaatcaaagcgttcctgcttcgcaactagtgttaggaatg
ccagcctacggtcgttcttacacaatggccaatgatacatgtctctcgttaggttgccct
ttccacgaagattccaatgaaaccgcaattggagggtgtttagatacaactggcttcatc
ccatacgtcgagatattccactgggagaaagacgctgagtacgaatctatatcagttgat
gctgcttcttattctgcagtcatggtaaaggacggagaccagctgatatcatacgacaac
aaagaaactttcaagtcaaaagtagactacgctgcgaagaagtgtctagggggcactatg
gtttgggcgattga
DBGET
integrated database retrieval system
