Thalassiosira pseudonana: THAPS_263310
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Entry
THAPS_263310 CDS
T01078
Name
(RefSeq) cytosolic alpha-mannosidase
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
THAPS_263310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPS_263310
Enzymes [BR:
tps01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
THAPS_263310
Membrane trafficking [BR:
tps04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
THAPS_263310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Motif
Other DBs
NCBI-GeneID:
7450614
NCBI-ProteinID:
XP_002295998
JGI:
263310
UniProt:
B5YNY8
LinkDB
All DBs
Position
7:1883538..1885894
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AA seq
741 aa
AA seq
DB search
MKICHVGHAHMDLVWLWPERVTYKKITHTFSNVLQLMDRYPEFTFTMSQPPLYYHIKEKE
PEMAAKIADKMKGGQWEFTGALEVEADTQIPVGEGLVRCILYGQERIKQVRGKKSDTVWI
PDCFGYTQCLPQLFSLSDIPNFFTTKILWSTVTKFPHNSFVWIGADGESSVLAHLSVAGY
NGQVTMKESMLATRNYSQADVHNEVLSATGYGDGGGGPNEDQIERSMRMKRSFGGQTPTC
QWGTVDSFFQRLSLVKEDLPVFRGELYLEYHRAVHTTQSNFKYNLRYCERALQTREAMRV
IGANYRPLDMKESWERYLFALFHDATPGSSIHTVYQELNRELCSLAERQVQSAIDEWPRL
DTLDDANMVVVVNPLPCSRTAVLEIPADVLPTSEASLLLCSTEDGNNNGYPVQLLDGQAY
ACVDMKGLISSPSLSATPTSLDNGVVHADFDEYGQLRAMSVHGKQLLLSNDESASFALHK
DNPEAYDAWDMDHHIVWMKENAIKKTITLSVHACGPVLSMLRSDPIHIGQNGSTIVIEYS
LHAYEDSLRVGCSVDWKEKHKTLRYQIPTQYRGDVARFGAPFNFVDRVAIPQGHKEEAQW
EVPGSRWASVLDGSMSDGLSVITQSKYGFRAKQGTLSLTLLRSSTEPDPKADEGKHKVQF
AITRHRNEYSNYPRWSPTAAKADELYTPLVVLTNPSSKATTSPPIEFTSLGSVVVSWVMP
SNTVHGYCIRLHETAGINTEI
NT seq
2225 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatgtcacgttggacatgctcacatggatttggtctggttgtggcctgaacgc
gtcacgtacaaaaagatcactcataccttttccaatgtgttgcagttgatggatcggtac
ccagagtttacgtttacgatgagtcagcctcctctttactatcatatcaaggagaaggag
ccggagatggcagcaaagattgcggacaagatgaagggtgggcagtgggagttcactggt
gcattggaagttgaagcagacactcaaattccggtgggtgagggtttagtacgatgcatc
ttgtacgggcaggaacgaattaaacaagtgcgggggaagaagagtgacactgtgtggatt
cctgactgcttcggctacacgcaatgtttgcctcagctcttcagtctttcagacattccc
aatttcttcacgacaaagatcctctggagtactgtaacaaagttccctcacaatagcttt
gtttggattggtgccgatggagagtcttctgttctagctcatctgtcggttgcagggtat
aacggacaagttacaatgaaggagtccatgttggcaactagaaactattctcaggccgat
gtgcacaatgaggtgttgagtgctacgggctacggtgacggaggaggaggtccaaatgaa
gaccaaattgaaaggtctatgcgcatgaaacgatcttttggtggacaaacgccaacgtgt
caatggggcaccgtcgactcattcttccaacgattatcattggtgaaggaggaccttcca
gtgtttcgcggcgagttgtatcttgaatatcatcgcgctgtgcatactactcaatcaaac
ttcaagtacaatctgcggtactgtgagagagcattgcagactcgggaggcaatgcgagtt
attggggccaactatcgcccattggatatgaaagagagttgggagcgatacttgttcgct
ttgtttcacgatgcaactccgggctcgtcaattcacacggtgtaccaagaattaaacaga
gagctatgctcgctagcagaacgccaagtgcaatcagctattgatgaatggcctcggctt
gataccttagatgatgccaacatggtggtggtcgtgaacccattgccatgctcgcgcact
gccgtcctcgagattcctgccgatgtgctccctacgagtgaggcttcgttacttctgtgc
tcgacggaggacggaaacaacaatggctatccggtgcagctcttggatggtcaagcttat
gcttgcgtagacatgaaaggattaatatcttctcctagtctatcagcaacgccaacatca
cttgacaatggcgttgttcatgcagacttcgacgaatatggtcagcttcgggccatgtcg
gttcatggcaagcagttactactatcaaatgacgagtctgcttcctttgcactccacaaa
gacaacccggaggcatatgacgcgtgggatatggatcaccatatcgtgtggatgaaagag
aatgccatcaagaaaactattacactcagtgtacacgcttgtgggccagttctctcgatg
ctcagatcagatccaattcatatcggccagaatggcagcacaatcgtgattgagtacagt
ctacatgcctatgaagactctttgcgagttggttgttcagtggactggaaagagaaacac
aaaacactgcggtatcaaataccaactcaatatcgcggagacgttgctcgttttggtgct
ccctttaactttgttgatcgtgttgcgattccacaagggcacaaggaagaggctcagtgg
gaagttcccggcagccgatgggcttctgtcttggatggttctatgtcggatgggctatca
gtcattacacagtctaaatatggcttcagagccaagcaaggaacgttgagtttgacacta
ctgaggtcttcgacggagcctgatccaaaagctgacgaaggaaaacacaaagtacaattt
gcaatcactcgtcaccggaatgaatactctaattatccgcgctggagtccaacggcagca
aaggcagatgaactctacacaccacttgtggtattgacaaatccatcaagcaaagcaacg
acctctcctccgattgaattcacatctcttggtagtgtcgttgtatcatgggtcatgcca
agcaacactgtgcatggctattgtattcgtctccatgaaactgctggtatcaataccgag
attga
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