KEGG   Thalassiosira pseudonana: THAPS_269942
Entry
THAPS_269942      CDS       T01078                                 
Name
(RefSeq) glycine or serine hydroxymethyltransferase, serine methylase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
tps  Thalassiosira pseudonana
Pathway
tps00260  Glycine, serine and threonine metabolism
tps00460  Cyanoamino acid metabolism
tps00630  Glyoxylate and dicarboxylate metabolism
tps00670  One carbon pool by folate
tps01100  Metabolic pathways
tps01110  Biosynthesis of secondary metabolites
tps01200  Carbon metabolism
tps01230  Biosynthesis of amino acids
tps01240  Biosynthesis of cofactors
tps04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:tps00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    THAPS_269942
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    THAPS_269942
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    THAPS_269942
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    THAPS_269942
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    THAPS_269942
Enzymes [BR:tps01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     THAPS_269942
SSDB
Motif
Pfam: SHMT Beta_elim_lyase
Other DBs
NCBI-GeneID: 7442966
NCBI-ProteinID: XP_002295557
JGI: 269942
UniProt: B5YLQ7
LinkDB
Position
18:complement(322361..324155)
AA seq 531 aa
MMSLRSSLPALRRAAATQSARIALPSAINTCTDLHQHHNHANVRTLSSSSSSGASLNQRL
TQVDPTLSTLIEQEKARQRSSLVLIASENFTSRAVLDALGSVLSNKYSEGYPGARYYGGN
ENIDRVELLCQERALETFGLSGEEWGVNVQSLSGSPANFQVYTALLETHDRILSLDLPHG
GHLSHGFQTPTKKISAVSRYFESMPYRLNSTTGQIDYDEMERSAELFRPKLIVAGASAYS
RLIDYERIREIADKVGAYVMADMAHISGLIAAEVIPSCFPYADVVTTTTHKSLRGPRGAM
IFFRKGKKGETKKGEPIMYDLEEKINFAVFPGLQGGPHNHTIGALAVALKQANTPEFVEY
QKQVLKNCARLNSELQSLGYEIVSGGTDNHLVLVNVKSSKGIDGARVERVLELACIASNK
NTVPGDTSALNPGGIRMGTPALTSRGFMEEDFAKVAHYFDRAVSIANKLKNTEEGKKMKG
FREMCAVGPSVDPELVQLRKEVSEFASSFPTVGFEESEMEFKGEYNVDFVA
NT seq 1596 nt   +upstreamnt  +downstreamnt
atgatgtctctccgttcatctcttccagccctacgtcgagcggctgccactcaatcagct
cgcatcgctctcccatcagccatcaacacatgcaccgacctccaccaacatcacaaccac
gccaacgttcgtaccctctcctcctcctcctcctccggagcatccctaaaccaacgcctc
acccaagtagaccccaccctctccaccctaatcgaacaagaaaaagcccgacaacgctcc
tccctcgtcctcatcgcctccgaaaacttcacctcccgcgccgtcctcgacgccctcggc
tccgtcctcagtaacaaatacagcgagggatatcccggtgctcggtattacggcggcaat
gagaatattgacagggtggaattgctttgtcaggagagagcgttggagacgtttgggttg
agtggggaggagtggggggtgaatgtgcagagtttgagtggcagtccggcgaactttcag
gtctacacagccctcctcgaaacacacgatcgcatcctctccctagacctaccccacggc
ggacacctctcccacggattccaaacacccaccaaaaagatctccgccgtctcacgatac
ttcgaatccatgccctatcgtctcaactccacaaccggtcaaatcgactacgacgaaatg
gaacggagtgccgaactgttccgtcccaagttgattgtggcgggtgcctctgcgtattcg
aggttgattgattacgaacgtatcagggagattgctgataaggtcggtgcgtatgttatg
gcggatatggcgcatatttcggggttgattgccgcggaggtaattccgtcgtgctttccg
tatgcggatgtggtgacgacgactactcataagtcgcttcgtggaccgaggggtgccatg
atcttcttccgaaagggaaaaaagggagagacgaagaagggagagcctattatgtatgat
ttggaggagaagattaactttgcagtgtttcctgggttgcagggtggacctcacaatcat
actatcggtgcattggccgtggcgttaaaacaggcaaatactcccgagtttgtcgaatat
cagaagcaagtgttgaagaattgcgctcggttgaattcagaattgcaatcgttggggtac
gagattgtgagcggtggcactgacaatcatttggtgttggtgaatgtgaagtcgtccaag
ggtattgatggagcacgagtggaacgtgtcttggagttggcctgcatcgctagtaacaaa
aacactgttccgggagatacctcggcactgaatcccggaggtattcgcatgggaacaccg
gcgttgacatcacgtggatttatggaagaagactttgccaaggtggctcattactttgac
agagccgtttccattgccaacaagttgaagaatacggaggagggaaagaagatgaaggga
tttagggaaatgtgtgctgttggacctagtgtagatccggagttggttcagcttaggaag
gaggttagtgagtttgcatcgagttttccaacggttgggtttgaggagagcgagatggag
tttaagggagagtacaatgttgattttgttgcctga

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