Thalassiosira pseudonana: THAPS_35360
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Entry
THAPS_35360 CDS
T01078
Name
(RefSeq) autophagocytosis protein-like protein
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
tps
Thalassiosira pseudonana
Pathway
tps04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
THAPS_35360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPS_35360
04121 Ubiquitin system [BR:
tps04121
]
THAPS_35360
03029 Mitochondrial biogenesis [BR:
tps03029
]
THAPS_35360
Membrane trafficking [BR:
tps04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
THAPS_35360
Ubiquitin system [BR:
tps04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
THAPS_35360
Mitochondrial biogenesis [BR:
tps03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
THAPS_35360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
7447096
NCBI-ProteinID:
XP_002295882
JGI:
35360
UniProt:
B5YNA8
LinkDB
All DBs
Position
7:<1218920..>1219918
Genome browser
AA seq
313 aa
AA seq
DB search
SAFLTRGVLTPEEFVKAGDELVYKCPTWTWESGDPAKRKKHLPADKQYLATRGVPCTARV
SSLENVVAVSNHNEGCGAIGGLDDDDGDWLVSQILTTEEVIRREEKALEDEFDILDGEGE
DNSENNQGGADDDQEDEYADMADFEDDNVLEDEAAVVAAPVSTNATTKGENDNNHILKVR
TYDLSITYDKYYQTPRVWLLGYADDGSSRPLTGDEMMQDVISDYAHRTVTIENHPNISGA
HASIHPCQHGAVMKTIVKNLTREGDGGDGESGGEGSGGPSVEMYLFIFLKFVSSMIPTIN
YDFTMDVSASTKK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
tccgccttcctcacccgaggcgttctcactcccgaagaattcgtaaaagccggagatgaa
ctagtctacaaatgccccacctggacttgggagagcggtgaccccgccaagcgaaagaag
caccttccggccgataagcagtatctggccacgagaggagtaccgtgcactgctcgtgtg
agtagtttggagaatgtggtggcggtatcgaatcataatgagggatgcggtgctattggt
ggtttggacgatgatgacggtgattggttggtgtcgcagatattgacgacggaggaagtg
attaggagggaagagaaggctttggaggatgagtttgatattttggatggagaaggagag
gacaatagtgagaacaatcaaggtggtgcagacgatgaccaagaggacgagtacgcagac
atggctgactttgaagatgacaacgttcttgaagacgaggccgcagttgttgccgctcca
gtatcaacgaatgcaacaaccaaaggagaaaatgacaacaaccacattctgaaagtacga
acatacgatctatccatcacgtacgataagtactaccaaactccacgagtctggctcttg
ggatatgcagacgatggatcttctcgtccactcactggagacgaaatgatgcaagatgtc
atcagtgactatgctcatcgtactgtgactattgagaatcatccaaacatcagtggagct
catgcttctattcatccgtgtcagcatggagcggtgatgaagaccattgtaaagaatttg
acgagggagggtgatggaggcgacggcgagagtggcggagagggaagtgggggtccgagt
gtggaaatgtatttgttcatctttttgaagtttgtgagttcaatgattcctacaatcaac
tatgactttacgatggatgtctctgcgtctacgaagaagtag
DBGET
integrated database retrieval system
