Thalassiosira pseudonana: THAPS_38129
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Entry
THAPS_38129 CDS
T01078
Symbol
RPN5
Name
(RefSeq) 26S proteasome regulatory subunit rpn5
KO
K03035
26S proteasome regulatory subunit N5
Organism
tps
Thalassiosira pseudonana
Pathway
tps03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
THAPS_38129 (RPN5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tps03051
]
THAPS_38129 (RPN5)
Proteasome [BR:
tps03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
THAPS_38129 (RPN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PSMD12-CSN4_N
PCI
RPN5_C
Peptidase_M99_m
Motif
Other DBs
NCBI-GeneID:
7450938
NCBI-ProteinID:
XP_002295522
JGI:
38129
UniProt:
B5YLI9
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Position
18:complement(134857..136273)
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AA seq
433 aa
AA seq
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SAALNDALSLLMALEKRCRVGNDTPSLVRVCQASLRLCHDANNDVEALVATLKNLSSRRS
QKSKAIAALVETCLPWIVSPDDMFTPLYVAPDTTASALRDRLVEELRSITDGKMYLEAER
ARLTRTIAIIYEGEGKVEEAADVLGEVHVETYGSLSKREKVEFILEQMRLTLMKKDYVRA
HIVSNKVKRSTLEEEGMATLKVKFYTLLASYYKHDKNALELAKCYHAIYSTACVQAVEES
EGENMGWKEALTNTIVFLCLSEYGNEVKDMMERVNVDIKLDKIVECNDTIKAFLKDEIIH
YPLPHQTTLESIPSLSNTQDDSDLKSHWHTTFHTRIIQHNLRTTSIYYRQIHLSRLSQLL
SLTPAETERHISQMVSFGSLYAKIDRPKDIVRFAKKRCEEEVLTDWAEDIKELLGLVEKT
TYLIQKENMVQSH
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
tccgccgcactcaacgacgccctctccctcctcatggcactcgaaaagcgatgccgcgtg
ggaaacgacacgcccagcttggtacgagtgtgtcaagcgtccctccggctctgtcacgac
gccaacaacgacgtggaggcgctcgtcgccactctcaagaatttgagttctcgtcgatct
caaaagtccaaagccatcgccgcgctcgtcgaaacgtgtcttccgtggatagtctctccg
gatgacatgttcacaccgttgtatgtcgctcccgacacgaccgcgtccgctttgcgtgat
agactcgtggaagaactgcggagcattaccgacggaaaaatgtacctcgaggcagagagg
gcgaggttgactcgaacgattgccattatttatgagggggaggggaaggtggaggaggcg
gcggatgttttgggggaggttcatgtggagacgtatgggagtttgagtaagagggagaag
gtggagtttattttggagcaaatgaggttgacgcttatgaagaaggactacgtccgtgct
cacattgtaagcaacaaagtgaagcgatcaaccctcgaagaagaaggaatggccaccctc
aaagtcaaattctacactcttctcgcatcatactacaaacacgacaaaaacgcattggag
ttggcaaagtgttaccatgccatttacagcacggcgtgtgttcaggccgtagaggagagc
gagggggagaacatggggtggaaggaggcattgacgaatacgattgtctttttgtgtttg
agcgagtatgggaacgaagtgaaggatatgatggaacgtgtcaacgtggatatcaaactg
gacaaaatcgtggaatgcaacgataccatcaaggccttcctcaaggatgaaatcatccac
taccccctaccccatcaaaccaccctcgagtccatcccatccttgtccaacacccaagac
gactccgatctcaaatcccactggcacaccaccttccacacacgcatcattcaacataat
ctccgcaccacgagcatctactaccgccagatccacctctctcgtctctcccaactcctg
tcgcttacacctgctgagacggagaggcacatttcgcaaatggtctcgtttggtagtttg
tatgccaagattgatcgtccgaaggatattgtgaggtttgcgaagaagaggtgcgaggag
gaggttttgacggattgggcggaggatattaaggagttgttggggttggttgagaagact
acatatttgattcagaaggagaatatggtgcagagtcattga
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