KEGG   Thalassiosira pseudonana: THAPS_41333
Entry
THAPS_41333       CDS       T01078                                 
Name
(RefSeq) WD-40 repeat containing protein
  KO
K14298  mRNA export factor
Organism
tps  Thalassiosira pseudonana
Pathway
tps03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    THAPS_41333
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tps03019]
    THAPS_41333
   03036 Chromosome and associated proteins [BR:tps03036]
    THAPS_41333
Messenger RNA biogenesis [BR:tps03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     THAPS_41333
Chromosome and associated proteins [BR:tps03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    THAPS_41333
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_DCAF4 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 7449242
NCBI-ProteinID: XP_002295824
JGI: 41333
UniProt: B5YMY9
LinkDB
Position
7:909879..911270
AA seq 363 aa
MSFGVAAAQTPQLVGSCTAGRAASATPNDHSVAQAGNDGITSVIWSPTANNLVSTNWDGG
VRCWEVQESAGQVRAMPKAQVNHENNSPVLDSCFSPDGTTVFSVGADKAVRMWQLGQTPT
NNVPQQIGAHDQPIKSVAFLPSTNMIVSGGWDNMLKFWDARQPNPVGSLQMPDKVYDLDV
RDSLMVVACAGRHIITYNVQGQPQEHERKESPLKFQSRCVAAFPDATGYAVGSIEGRVGI
QYVTKVPGKESFAFKCHRDQSKVFPVNNICFHKQFGTFATVGGDGIINFWDKDNKQRLKG
FPAIHRTITCANFSAQGNLFAYASSYDWHKGSSGYAPGTPNEIWVHSVQEEEIKPKAKKT
GYR
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgtcctttggagtagccgccgcacaaaccccccaactagtaggctcctgcacagccgga
agagccgcctccgccacccccaacgaccacagtgtcgcccaggcaggcaacgacggcatc
acctctgtcatttggagtccgacggcgaacaacttggtgtccactaattgggatgggggt
gtgcgatgttgggaggttcaggagagtgcggggcaggttagagctatgcccaaggctcag
gtcaaccacgaaaacaattctcccgtcctcgactcctgcttctcccccgacggcaccaca
gtcttctccgtaggcgctgacaaggccgtgcgaatgtggcaacttggacaaactcccacc
aacaacgttccccaacaaattggagcacacgatcaacccatcaaatctgtagcgttccta
ccttccactaacatgattgtatcagggggctgggataatatgctgaaattttgggacgcg
aggcaacccaatccggtgggatcactgcagatgccggataaggtgtatgatttggatgta
cgtgatagtttgatggtggtggcttgtgcggggaggcacatcattacttataacgtgcag
ggtcaaccgcaggaacatgagaggaaggagagtccgttgaagtttcagagtcgatgtgtg
gctgcctttccggatgctactggttatgccgtggggagtatcgagggcagggttggcatc
caatacgtgacaaaagttcccggaaaagagtcctttgcattcaaatgccatcgtgaccaa
tcaaaagtctttcccgtcaacaatatttgcttccacaaacaattcggcacctttgcaacc
gtgggaggagacgggatcatcaatttttgggacaaggataacaaacagaggctcaaggga
ttcccagccattcaccgaacaatcacatgtgccaatttcagtgctcaggggaatttgttt
gcgtatgcgagtagttatgattggcacaagggaagttcgggttatgctcctgggactccg
aatgagatttgggttcacagtgtgcaggaggaggagattaagccaaaggcaaagaagact
ggttacagataa

DBGET integrated database retrieval system