KEGG   Thalassiosira pseudonana: THAPS_42719
Entry
THAPS_42719       CDS       T01078                                 
Symbol
ASSY
Name
(RefSeq) ASSY
  KO
K01940  argininosuccinate synthase [EC:6.3.4.5]
Organism
tps  Thalassiosira pseudonana
Pathway
tps00220  Arginine biosynthesis
tps00250  Alanine, aspartate and glutamate metabolism
tps01100  Metabolic pathways
tps01110  Biosynthesis of secondary metabolites
tps01230  Biosynthesis of amino acids
Module
tps_M00029  Urea cycle
tps_M00844  Arginine biosynthesis, ornithine => arginine
Brite
KEGG Orthology (KO) [BR:tps00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    THAPS_42719 (ASSY)
   00220 Arginine biosynthesis
    THAPS_42719 (ASSY)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tps04147]
    THAPS_42719 (ASSY)
Enzymes [BR:tps01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.5  argininosuccinate synthase
     THAPS_42719 (ASSY)
Exosome [BR:tps04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   THAPS_42719 (ASSY)
SSDB
Motif
Pfam: Arginosuc_syn_C Arginosuc_synth QueC tRNA_Me_trans Ish1
Other DBs
NCBI-GeneID: 7442179
NCBI-ProteinID: XP_002295518
JGI: 42719
UniProt: B5YLI4
LinkDB
Position
18:complement(123784..>125422)
AA seq 418 aa
MSTPTKPKVVLAYSGGLDTSVILKWLCEKGFDVIAFCADVGQHHEDFEAVKAKAVSCGAL
KCIVTDLRKDFVSNYIFEALKCNAIYEGRYLLGTSVARPCIAKEMVRIAAEEGASYVAHG
ATGKGNDQVRFEMCAQALDAKIKTIAPWRDAEFIESFKGRSDLLAYCTKHGIPVDAKPKS
NYSIDENLFHTSYESGVLEDAAATYEEDMFKMTVSPKAAPEESTLVDVEFVKGIPVKLTN
KTDGTTDPLELFMYANEIAGANAIGRIDIVENRFVGIKSRGVYETPGGTLLRDAHMDLEG
ICMDREVKRITENLGSEFARLCYNGFWFAPEMDLIRHSVTYSQKDVTGVVSLELYKGNII
CRGRTSPFALYNPDLASMDIEGGGDDFDYNPSDAAGFIRINAVRLKTYAALRAKAGDN
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgtcaacccccaccaaacccaaggtagtcctagcctactccggcggcctcgacacctcc
gtcatcctcaaatggctgtgcgaaaagggcttcgatgtcatcgccttctgcgccgacgtc
ggccagcaccacgaagactttgaagccgtcaaagccaaggccgtctcctgcggcgctctc
aagtgcatcgtcaccgacctccgcaaggactttgtctccaactacatttttgaagctctc
aagtgcaacgccatctacgaggggcggtacctcctcggaacgtccgtggcacgtccctgc
atcgccaaggagatggtacgcatcgccgccgaagagggagcgtcgtacgtagctcacggt
gccaccggaaagggtaacgatcaggtccgtttcgaaatgtgtgctcaagccttggatgcc
aagatcaaaaccatcgctccgtggcgtgatgccgaattcatcgagtccttcaagggacgt
tcggacttgctggcgtactgcaccaagcatggtattcccgtggatgccaagcccaagtcg
aactactccattgatgagaatcttttccacacgagttatgagagtggtgttttggaggat
gcggcggcgacgtatgaggaggatatgtttaagatgacggtgagtccgaaggcggctccg
gaggagagtacgttggtggatgtggagtttgtcaagggtattccggtcaagttgactaat
aagacggatggaactaccgaccccctcgaactcttcatgtacgccaacgaaatcgccgga
gccaacgccatcggccgtatcgacattgtcgaaaatcgcttcgtcggcatcaaatcccgt
ggagtctacgaaacacccggcggaaccctcctccgcgatgcccacatggacctcgaggga
atttgtatggatcgtgaagtgaagcgtattacggagaatttggggagtgagtttgcgaga
ttgtgttacaatgggttttggtttgctcctgagatggatttgattaggcattcagtgacg
tattcgcagaaggatgttacgggggtggttagtttggagttgtacaaagggaatatcatt
tgcaggggaaggactagtccgtttgcgttgtataatcctgatttggcgagtatggatatt
gagggtggcggagatgactttgattataatccgagtgatgctgctggattcattaggatt
aatgccgtgaggttgaagacttatgctgcgttgagggccaaggctggagataactaa

DBGET integrated database retrieval system