KEGG   Thalassiosira pseudonana: THAPS_596
Entry
THAPS_596         CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K12400  AP-4 complex subunit epsilon-1
Organism
tps  Thalassiosira pseudonana
Pathway
tps04142  Lysosome
Brite
KEGG Orthology (KO) [BR:tps00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    THAPS_596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tps04131]
    THAPS_596
Membrane trafficking [BR:tps04131]
 Endosome - Golgi transport
  Others
   AP-4 complex
    THAPS_596
SSDB
Motif
Pfam: Adaptin_N Cnd1 HEAT_2 INTS1_R4 Lactamase_B_5 PIP49_C
Other DBs
NCBI-GeneID: 7447076
NCBI-ProteinID: XP_002296218
JGI: 596
UniProt: B5YN73
LinkDB
Position
7:complement(1122794..1124259)
AA seq 435 aa
MSGMHLSKEFFELIKAIGESKSKQEEDRIIQREVMTLKKKLETAPTPGSGNGLNTNKKKA
REFLVRVLYVEMLGHDGSFGYIKAVELAASQSIIHKRTGYMVCSCCLSPEHEFRFMLVNQ
MQRDLISSNLLESCGALIAVTNLITADLVGTVSTQVIGLLDHTAETVRKKAIIALHRLHQ
LSPDIVTQQEVVEKVRRMLCDRDPAVMGSTLNVIEAMSRVDVHPFKDLVPSLISILKQIC
ERRLPSEYDYHRIPAPWMQMKIVRILSVIGKNDAQSSEGMYEILGDCLRKADEAGINASN
AIVYECIRCITTIYPNPVLLDAAGASISRFLSSRSQNLRYLGVTGLASIVERHPKYAAEH
QLAVIECLEDKDDTLLRKTLDLLYRMTNPVNVEFITDRLLHFLRGATDPYLKSDLTEKIC
TIAERYAPSNAWGLG
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgtccggaatgcacctctccaaagagttcttcgaactcatcaaagccatcggcgagtca
aaatcaaaacaagaagaagatcgcattatccaacgtgaggtcatgacgttgaaaaagaag
cttgagaccgctccaacaccgggatcggggaatgggttgaatacgaataagaagaaggct
agagagtttttggttagggtattatatgtggagatgctagggcatgacggaagctttggg
tatatcaaggctgtggaactagcagcctctcaatccataatccacaaacgtaccgggtac
atggtctgttcctgctgtctctctcctgagcacgagttccgtttcatgctcgtcaatcaa
atgcaacgtgatctcatctcttccaacctcctcgaatcatgtggtgccttgatcgctgtg
actaatctcattacagccgatctcgtggggacagtcagtacccaggttattggactgctt
gatcataccgctgagactgtaaggaagaaggctatcattgccttgcacaggttgcaccag
ttgtctcccgacattgttacgcagcaggaggttgttgagaaagtgaggaggatgttatgc
gatcgtgaccctgccgtgatgggatctactttgaatgtaattgaggcgatgtcacgtgtg
gacgtccatcccttcaaggatcttgttcctagtttgatttccatcttgaagcaaatttgc
gagaggcgtttgcctagcgagtatgactatcacaggattccagctccttggatgcagatg
aagattgtgaggattctatcagtgattggaaagaatgatgctcaatctagtgagggaatg
tatgagattttgggagattgcttaaggaaggccgacgaggctggtatcaacgcaagcaat
gctatcgtgtacgagtgtatcaggtgcatcaccacgatttatcccaacccagtcttattg
gatgcagcgggggcgtcaatctctcggttcctatcgtctcgctcacagaatttgcggtac
ctcggtgtaactgggttggcatcgattgtggaacgtcatccaaaatatgccgcggagcat
cagctagctgtgattgagtgtttggaggataaggatgataccttgttgagaaagactttg
gacttgctttaccgaatgacaaaccctgtcaatgtggagttcattacagatcgtttgttg
cacttcttgcgaggtgccactgatccttatttgaagtcagatctcacggaaaagatttgc
accattgctgagaggtatgctccatccaacgcttggggacttggttga

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