Thalassiosira pseudonana: THAPS_596
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Entry
THAPS_596 CDS
T01078
Name
(RefSeq) predicted protein
KO
K12400
AP-4 complex subunit epsilon-1
Organism
tps
Thalassiosira pseudonana
Pathway
tps04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
THAPS_596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPS_596
Membrane trafficking [BR:
tps04131
]
Endosome - Golgi transport
Others
AP-4 complex
THAPS_596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
INTS1_R4
Lactamase_B_5
PIP49_C
Motif
Other DBs
NCBI-GeneID:
7447076
NCBI-ProteinID:
XP_002296218
JGI:
596
UniProt:
B5YN73
LinkDB
All DBs
Position
7:complement(1122794..1124259)
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AA seq
435 aa
AA seq
DB search
MSGMHLSKEFFELIKAIGESKSKQEEDRIIQREVMTLKKKLETAPTPGSGNGLNTNKKKA
REFLVRVLYVEMLGHDGSFGYIKAVELAASQSIIHKRTGYMVCSCCLSPEHEFRFMLVNQ
MQRDLISSNLLESCGALIAVTNLITADLVGTVSTQVIGLLDHTAETVRKKAIIALHRLHQ
LSPDIVTQQEVVEKVRRMLCDRDPAVMGSTLNVIEAMSRVDVHPFKDLVPSLISILKQIC
ERRLPSEYDYHRIPAPWMQMKIVRILSVIGKNDAQSSEGMYEILGDCLRKADEAGINASN
AIVYECIRCITTIYPNPVLLDAAGASISRFLSSRSQNLRYLGVTGLASIVERHPKYAAEH
QLAVIECLEDKDDTLLRKTLDLLYRMTNPVNVEFITDRLLHFLRGATDPYLKSDLTEKIC
TIAERYAPSNAWGLG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaatgcacctctccaaagagttcttcgaactcatcaaagccatcggcgagtca
aaatcaaaacaagaagaagatcgcattatccaacgtgaggtcatgacgttgaaaaagaag
cttgagaccgctccaacaccgggatcggggaatgggttgaatacgaataagaagaaggct
agagagtttttggttagggtattatatgtggagatgctagggcatgacggaagctttggg
tatatcaaggctgtggaactagcagcctctcaatccataatccacaaacgtaccgggtac
atggtctgttcctgctgtctctctcctgagcacgagttccgtttcatgctcgtcaatcaa
atgcaacgtgatctcatctcttccaacctcctcgaatcatgtggtgccttgatcgctgtg
actaatctcattacagccgatctcgtggggacagtcagtacccaggttattggactgctt
gatcataccgctgagactgtaaggaagaaggctatcattgccttgcacaggttgcaccag
ttgtctcccgacattgttacgcagcaggaggttgttgagaaagtgaggaggatgttatgc
gatcgtgaccctgccgtgatgggatctactttgaatgtaattgaggcgatgtcacgtgtg
gacgtccatcccttcaaggatcttgttcctagtttgatttccatcttgaagcaaatttgc
gagaggcgtttgcctagcgagtatgactatcacaggattccagctccttggatgcagatg
aagattgtgaggattctatcagtgattggaaagaatgatgctcaatctagtgagggaatg
tatgagattttgggagattgcttaaggaaggccgacgaggctggtatcaacgcaagcaat
gctatcgtgtacgagtgtatcaggtgcatcaccacgatttatcccaacccagtcttattg
gatgcagcgggggcgtcaatctctcggttcctatcgtctcgctcacagaatttgcggtac
ctcggtgtaactgggttggcatcgattgtggaacgtcatccaaaatatgccgcggagcat
cagctagctgtgattgagtgtttggaggataaggatgataccttgttgagaaagactttg
gacttgctttaccgaatgacaaaccctgtcaatgtggagttcattacagatcgtttgttg
cacttcttgcgaggtgccactgatccttatttgaagtcagatctcacggaaaagatttgc
accattgctgagaggtatgctccatccaacgcttggggacttggttga
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