Thalassiosira pseudonana: THAPS_7100
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Entry
THAPS_7100 CDS
T01078
Name
(RefSeq) predicted protein
KO
K11492
condensin-2 complex subunit G2
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPS_7100
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
THAPS_7100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Condensin2nSMC
PDS5
UFL1
VPS15-like_hel
SCD
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
7447105
NCBI-ProteinID:
XP_002296247
JGI:
7100
UniProt:
B5YNC6
LinkDB
All DBs
Position
7:complement(<1283686..>1288017)
Genome browser
AA seq
1345 aa
AA seq
DB search
MTPHFNLDDTLNTTTRTASNYASSEDETNLSRTRIVDYPSSDDDDNNVNEPASTKISHTE
LFEAVESSIISTRPLVDFFYQGGVDDVIVGGGSGGRAERREAICNIVKSNKFNKARARRL
FAGLIPLLRKICDEEGYLPEQQQQQPADEREEEEEEYEFGEADNDNNATTDDESSKRAIL
FLRISAQLITSYLQGILSKQTKKQRSDKQQQSPKLPVIDEAFEVAEMLHDLLFPLNNCPT
KYGQQQAQSAIFTMCETWWHGNFEDREQMVTQLIPLLLLKSLDTSAQATDVKRLCGIRHA
IDLLDFEDESIASLKNHLVRTVCNPLFLQSVDGRRFVSHLFQADASLVGELHKAIKVQLP
HAKKSILNAYAEIYYNSWKGSMMENNEEVHASIEENALQDFMHQVIHAACPSTAKAVRTV
LDKFYLHKKTPEVEGMLFRMYGPLLWRALSATNAKVRMQASVVLADTFPLKDPEGGQEWT
EQCVKKTVAALVSLMGDNVPSVRVAGSVATAKILSGFWVAIPANDIRVLLNHIVAKHASD
VTSALVRVSAVNAITTLLEEDKTHAVLRPLLPSLGNLIHDKTEKVRLAVVNMLLYVKKIR
GMKYYHVVPAKHLLARLADEGRGRNNATGSVAQSLSELLSNSFFPSGKKNTMSDIITRTL
RLLDDNPGAAVTFYRNASTQLTVNSIAKLITALMKCLCYLIMEEKKHHGEDVTNLSQVVD
EDESVECNNIHGDVYRESNTAMMATIAESVSILWESIEEKLKEAENEDAHENLVEVFSGN
VLTDIICYFEKKFKADGSEDRKLSDCFRAYVAILNCAGKLDKDKIEGLRAHVIGELAESS
TISAEKRSNANFSSYASLLCAWGMADEVSDCLANSISYYFDNGENDEQAVEFTQKATGTK
KRKPRGKKGTETKSLPRLPIDVSLGILGHVLNGTFPASASARESILKTDNGFDVIIVALQ
KAQVAADSLLRPRNSEVNIAAVKNIGNAIECYGRLILHNEATKDEFPMRLSVEASSLMTW
ISESIVPSFVKMIDQNDTLRDLDISGISGIDSPMSNAPPKRKSTRNSSFLPMFPRFSETA
IPEDDPFNVYQEHTKFTRTAAICAMKSVLCIITEWIDVRGIVDPSVSNHVTKWCKVLKCS
DDTVKKTLLPIFSRLALLCLKNDADSSLSKELLLCLENDSFNSSDEKVIAEFVSTLAFFR
DTASIQAFIRAAVQATSSGLQKLELNNDEAESDKPFIDKVGACMKSVLMCVFRESKTSLA
LAQYLANEAKFLSVRSDLFKELLAHAPKTPAMNKVLSQWKRENAIVEDEDAEDESADGDD
SDEIVDEVGNDFSLVQPEMPTAVSA
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgacaccccatttcaatctcgacgatacactcaacaccaccacccgcactgcatccaac
tacgcctcctccgaagacgaaacaaatctctcacgcacgcgcatagtcgactacccctcc
tccgatgacgacgacaacaacgtcaatgaacccgcctccacgaaaatatcacacaccgag
ttattcgaggcagtagaaagcagtatcatttctactagaccattggtcgacttcttttac
caaggaggggtcgatgacgttatcgtcggtggtggtagcggagggcgtgccgaacgaaga
gaggcaatttgtaacattgtcaaatccaataaattcaataaggcacgtgctcgtcggtta
tttgcggggttgatccctttgttgaggaagatttgtgacgaggagggatatttgccggag
cagcagcagcagcagcctgcagatgaacgagaggaggaggaggaggaatatgagtttggt
gaggcagacaacgacaacaatgcaacgactgacgacgaatcaagcaaacgtgctattcta
ttcctacgaatctccgctcaattaatcacatcttacctccaaggaatactctccaaacaa
accaaaaaacaacgttccgataaacaacaacaatcacccaaactaccagtcattgacgaa
gcgttcgaagtagccgaaatgctccacgatctattattcccactgaacaactgccctacc
aaatacggacaacaacaagcacaatctgccatctttaccatgtgtgaaacatggtggcac
gggaatttcgaagatcgtgaacaaatggtaactcaactcatacccctactattactcaag
agtttggacacctcggctcaagcaacggatgtcaagagactatgcggtattcgtcatgcc
attgatttgttggattttgaagatgagagtatagcctccctcaagaatcatttggtgagg
accgtgtgtaaccccctctttttacagagtgtggacggacgtaggtttgtatctcacttg
ttccaagcggatgcttccttggtgggggaattgcacaaggcgattaaggttcagttgcct
catgccaagaagagtattttgaatgcctatgccgagatttactacaattcatggaaggga
tcgatgatggagaataacgaagaagtgcatgcttctattgaggagaatgcattgcaggat
ttcatgcatcaggtgattcatgcggcttgtccttccactgccaaggctgtgcgtactgtg
cttgacaagttctaccttcacaaaaagacaccggaggtggaaggcatgttgtttcgaatg
tacggaccactattatggagggcactctctgcgaccaatgccaaggtacggatgcaagcc
tcggtagttttagccgatacatttccgttgaaggatccagagggaggtcaagagtggacg
gagcaatgcgtgaagaagactgtggctgcgttggtatcgttgatgggcgataatgtgccc
agtgtgagggttgcggggagtgttgctacggcaaagatattgtcgggtttttgggtggcg
attcctgccaatgatattcgtgtgttgttgaaccacattgttgcaaagcatgcgtctgat
gtaacatccgctctcgtgagggtatcagccgtaaatgccatcacaactcttttggaagag
gataagactcatgcagtccttcgtcctttgcttccatctctcggcaacctcatccacgac
aagaccgagaaggtccgtctcgcagtagtcaacatgctactctacgtcaagaagattcgt
ggaatgaagtattatcacgtagttccagccaaacacctcctagcccgtttggcagacgaa
ggacgtggtcgcaacaatgccactggttcagttgcacagagcctctccgaactgctcagc
aactccttcttccctagtggaaagaaaaataccatgtcggacatcatcactcgtacctta
cgtcttctcgatgataatccaggtgctgccgtcaccttctatcgcaatgcttccacacag
cttaccgtcaactccattgccaagttgatcactgctctcatgaagtgtctatgctacttg
atcatggaggagaagaaacaccatggcgaggatgttacgaatctgtctcaggtggtggat
gaggacgagtctgtggagtgtaacaacattcatggagatgtgtacagagagtccaatact
gctatgatggctacgattgccgaaagtgtttccatcttgtgggagtctattgaggaaaag
ctcaaggaagccgagaacgaagatgcccacgagaatctcgtggaagtgttctccggcaac
gtcctcactgatatcatctgctactttgagaaaaaattcaaagcggatggatccgaggat
cgcaagttgagtgactgcttccgtgcatatgttgccatattgaactgtgccggaaagttg
gataaggataagattgaagggcttcgtgctcatgtcattggtgaacttgccgagtcgtct
accatttctgccgagaaacgatcaaatgcaaacttcagttcctacgcctcccttctttgt
gcctggggtatggctgatgaagtctctgactgcctcgcaaactccatttcgtactacttt
gacaatggcgaaaatgacgagcaggctgttgaattcacccaaaaggcaactggtacgaag
aagaggaagcctcgtggcaaaaagggtactgagacgaaatctttgccacgtcttcccatt
gacgtaagcctcggcattcttgggcatgtactgaatggaacgttccctgcatctgcgtct
gcaagagagtccatcttgaagacagataatgggtttgatgtcatcattgtggcgttgcag
aaggcacaggttgcagccgattctcttctacgcccgaggaattcagaggtgaacattgct
gccgtcaaaaatattggcaatgccattgagtgctacgggaggctcattcttcacaatgag
gcaacgaaggacgagttcccaatgagactatctgtggaggcatcttcgttgatgacgtgg
atatctgaatccatcgttccatcatttgtcaagatgattgatcagaacgatactctgagg
gatctcgatatttcgggaatatctggcatagattcacccatgagcaatgctcctcccaaa
cgcaagagcactcgtaactcctcttttttgccaatgttccctaggtttagtgaaactgcc
atccctgaagacgaccctttcaatgtttatcaagagcacacaaagtttacccgtaccgct
gccatttgtgcaatgaaaagtgtgctgtgtattatcactgagtggatagatgtccgtggc
attgtcgatccatctgtgtccaatcacgttacaaagtggtgtaaagtactcaagtgctcg
gatgataccgtgaaaaaaacacttcttccgatcttttctcgtcttgcacttttgtgtttg
aagaacgatgcagattcgtccttatccaaagaactactcttgtgcttagagaacgacagc
ttcaattccagcgacgaaaaagtcattgccgagtttgtgtcaaccttggctttcttccgc
gacaccgcttcaatccaggccttcatcagagctgcagtacaagcaacctccagtggcctt
caaaagttagaactgaacaatgatgaagcagagtcggacaagccgtttattgataaggtt
ggagcttgcatgaaatcggttctaatgtgtgtgttccgtgagagtaagaccagtttggca
cttgcacagtacctcgctaacgaagccaagtttttatcggtaaggtcggatcttttcaag
gagcttctagctcatgctccgaagacacccgcaatgaacaaagtgttgagccagtggaag
cgtgagaatgcaatagtcgaggatgaagatgcagaggatgaaagtgccgacggagacgac
tctgatgaaattgttgacgaggtcggaaacgacttttctctcgtacaaccggagatgccg
actgccgtctcagcttag
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