Thalassiosira pseudonana: THAPS_7322
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Entry
THAPS_7322 CDS
T01078
Name
(RefSeq) translation initiation factor eIF-2, gamma subunit
KO
K03242
translation initiation factor 2 subunit 3
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tps03012
]
THAPS_7322
Translation factors [BR:
tps03012
]
Eukaryotic type
Initiation factors
eIF-2
THAPS_7322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2_C
GTP_EFTU
GTP_EFTU_D2
Dynamin_N
DUF1582
Motif
Other DBs
NCBI-GeneID:
7443409
NCBI-ProteinID:
XP_002296355
JGI:
7322
UniProt:
B5YNZ5
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Position
7:complement(1916830..1918735)
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AA seq
483 aa
AA seq
DB search
MEKSQPHLMAQDAATVDASKLTALTPEVISRQATINVGTIGHVAHGKSTVVKAISGVQTV
RFKNELERNITIKLGYANAKIYKAAPPPAIEEGKEDTAATNTEVIPGTSYPMYTSRGSSH
PDTFVDPKTNVTYHLRRHISFVDCPGHDILMATMLNGAAVMDGALLLVAGNETCPQPQTS
EHLAAVEIMRLKNIIILQNKVDLVKMDAAIAQQEQIRKFVVGTVADSAPILPISAVLKYN
VDLVCEYLVHKIPVPVRDFTSVPRLIVIRSFDVNKPGQDVSNLQGGVAGGSILQGVLRVG
DEIEVRPGIVTKKENEDGGTTVVCSPIFSRISSLYAESNDLQYAVPGGLIGVGTRIDPTL
TRADRLVGQVLGLRGKLPQVYAEIEISYYLLRRLLGVKTSDGGKQAKVQKLTKGEILMVN
IGSTGTGGKVEGAKSDLAKISLTQPVCTQEGEKIALSRRVDKHWRLIGWGEIKRGKKIEV
LEP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagagtcagccccatctaatggcacaagatgccgccaccgtcgatgcgagcaag
ttgaccgcgttgactccggaggtgatatcccgtcaagccaccatcaacgtcggaaccatc
ggtcacgtcgcccatggaaaatctaccgtcgtcaaagccatctccggagtccaaaccgtc
cgtttcaagaacgaacttgaacgtaacatcaccatcaaactaggatacgccaacgccaaa
atctacaaggctgctcctcctccggccattgaggaaggaaaggaagataccgccgctact
aatacagaagtcatccccggtacttcttatccaatgtacacttcacgtggatcatcccat
cccgataccttcgtcgaccccaaaacaaacgtgacctaccacctccgtcgtcacatctcc
ttcgtcgattgtcccggccatgacattctcatggcaaccatgctcaacggagctgccgtc
atggacggagctctcctcctcgttgcaggaaatgaaacctgtcctcaaccccaaacatcg
gagcatctcgccgctgtggaaatcatgcggcttaaaaacattattattctacaaaataag
gtggatttggtcaagatggatgcggctattgcgcaacaggagcaaatccgaaaatttgtc
gtgggtaccgtagccgatagtgctcccattttgcctattagtgctgtgttgaagtacaat
gtcgatctggtctgtgagtacttggttcacaagattcctgtcccggtgagggactttacg
agcgttccccgattgattgtcattcgaagttttgacgtgaataagcctggacaggatgtg
agtaacctgcagggaggagtggctggagggtccatcttgcagggagtgctcagggttgga
gatgagattgaagtgaggcctggaattgttaccaagaaggagaatgaggatgggggtacc
accgtggtatgcagtcccatattctcgcgtatttcgagtttgtacgcggagagtaatgat
cttcaatatgctgtcccgggcggattgattggagttggaacacgtattgatcctacgtta
actcgtgcggataggcttgttggacaagtgttgggattgcgaggaaagcttccccaggtg
tatgccgagattgagatttcgtactaccttctccgtcgtttgcttggagtcaagacctcg
gatggagggaagcaggccaaggttcagaagttgaccaagggtgagattttgatggtcaac
attggttctactggtacgggaggtaaagtggagggtgcaaagagtgatttggctaagatt
tctttgactcaaccggtatgtactcaggagggagagaagattgcacttagtaggagggtg
gataagcattggaggttgattggatggggagagattaagaggggtaagaagattgaggtt
cttgagccttaa
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