Thalassiosira pseudonana: THAPS_803
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Entry
THAPS_803 CDS
T01078
Name
(RefSeq) synaptobrevin
KO
K08515
vesicle-associated membrane protein 7
Organism
tps
Thalassiosira pseudonana
Pathway
tps04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
THAPS_803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPS_803
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tps04147
]
THAPS_803
Membrane trafficking [BR:
tps04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
THAPS_803
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
THAPS_803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
DUF1140
Motif
Other DBs
NCBI-GeneID:
7442959
NCBI-ProteinID:
XP_002295398
JGI:
803
UniProt:
B5YLP4
LinkDB
All DBs
Position
18:300127..301137
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AA seq
221 aa
AA seq
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MTIVYALVSRQKTVLAEYTATSGNFPTVTRVLLSKIPPVDGRMTYVYDEYTFHYVTEGGI
CFLCMSDEQNKHRIPFAFLQEVKDLFTSKYGLEVPQRAIAFSLNEEFSRTIKDRMDYYND
AGSNVDGLSAVKNQIDAVKDNMVQNIESVLERGEKIELLVDKTDRLNQAAFKFESSSRNL
RRAMWWKNVRWVGFLIVAGGFFVFFVASLFCGFDFHRCKAH
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgactatagtatatgcactcgtcagtcgccaaaagactgtgctggctgagtacacagcg
acgtctggcaactttcccacagtaacacgagttcttctgagtaagatccctcccgttgac
ggtcgcatgacgtacgtctacgatgaatacacattccactacgtaactgaaggaggaatt
tgcttcctctgcatgagtgacgaacaaaacaaacatcgcataccgtttgcctttctccaa
gaagtaaaggatctcttcacgtcaaagtatggattggaagttccccaacgtgccattgca
ttcagtctcaacgaagagttctcgcgtacgatcaaagatcggatggactattacaatgat
gccgggagcaatgtggatggattatcggctgtgaagaatcagattgacgcagtcaaggat
aacatggtgcaaaatattgagagtgtattggaacgaggggagaagattgagctgttggta
gataagacggatagattgaatcaagccgcgttcaagtttgagagttcaagtaggaacttg
agaagagcaatgtggtggaagaatgtgcgatgggttggttttctgattgtggctgggggc
ttctttgtattctttgtggcttcgttattttgtggatttgactttcaccggtgcaaggct
cattag
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