Tunturiibacter psychrotolerans: RBB77_00175
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Entry
RBB77_00175 CDS
T10213
Name
(GenBank) efflux RND transporter permease subunit
KO
K07789
multidrug efflux pump
Organism
tpsc Tunturiibacter psychrotolerans
Pathway
tpsc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tpsc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RBB77_00175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpsc02000
]
RBB77_00175
Transporters [BR:
tpsc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RBB77_00175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
XCB33330
UniProt:
A0AAU7ZQY0
LinkDB
All DBs
Position
39098..42430
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AA seq
1110 aa
AA seq
DB search
MHFSAPFIRRPVATFLLSLAVILAGAVAYTLLPVASLPQVEFPVISVGASLPGADPETMA
SSVATPLERQFSKIAGVNEMTSSSSTGTASIVLQFDLTRDVNGAARDVQAAINAARSQLP
ANLPSNPGYYKVNPADSPIMILALTSDTMNIPQLYDACDSILAQKIAQIPGVGQTFCGGS
SKPSVRIEANPLQLAHYGVGLEAVRAAIGTVNVNQPKGYLQDDTRRWSVSATDQLFGAAA
YAPLIVATDRGPVSSAAASSGLPASVASALTSNPQAVNGGAGSTTTNTATTAASIGTSSP
VAAPTASASTGMTAGPATAHGIVRIEDVAKVVDSVEDVHGTGVFNGKPAILVIVFKTSTA
NVIETVDNVKKMLPLLEASIPPAISVHVALDRTTTIRASVKDVTRTLVISILLVILVVFL
FLREVRSTLIPTVAVPLSLLGTFAVMYLLGYTLDNLSLMALTISTGFVVDDAIVVIENIS
RHLEAGMSPYQAAMLGSKEIGFTVVSMSTSLIAVFIPILLMGGIVGRLFREFAVTLSVAI
MVSLVVSLTTTPMLSAKFLEAHNRRKHGWFYRSGERALEWLAAEYELGLRWVLKHQKLVL
TITVLTFVLNVYLYILVPKGFFPEQDAGRIGGQVQGQQDVSFPELKKKVLALAAIAGKDP
GVQDVTAFAGGRGNVNSGFMFMALKPDAERKKTGDTAQVIVDRLRPQMTSVPGAVMYLQA
FQDLRIGGRNTATEYQYTLTADNLKELNEWGPKLEAAMDQLPQIKDVATDEQQEGLRGQL
VIDRATASRLGVSPLTIDSTLSDAFAQAQVSTTYMPLNQYHVVLEVPPEFQEDPDALKNI
YVKSTTGAMVPLSAMTHFETQRIPLAVNHQSQSPATTLSFNLAPGASLSEATQAIQQARV
DIGMPSAIHGGFAGSAQAFKDSLKSEPWLILLALVAVYLVLGILYESFIHPLTILSTLPS
AGVGAIVALLLFKVDLSVIAMIGIILLIGIVKKNAIMMIDFALLAERQHGKTPQEAIFEA
CMLRFRPIMMTTMAAMLGGLPLALGRGAGSETRRPLGITIVGGLIVSQALTLFTTPVVYL
FFDRVRGRFARMGRRRRAGRRVAEVVVAGD
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgcatttttcagcaccatttattcggcggcctgtagcaacatttctgttgtcgctggcg
gtgattctggcaggtgcagtggcttacacgctgctgccggtggccagtctgccgcaggtg
gagttcccggtgatctcggtgggtgcgagtttgccgggcgccgatccagagacgatggct
tcgtcggtggcgacgccgctggagcggcagttctcgaagatcgcgggtgtcaatgagatg
acgtcgtcgtcttctaccggcacggcctctattgtgctgcagtttgatctgacgcgtgat
gtgaatggtgcggcgcgtgacgtgcaggcggcgatcaatgcggcgcggagtcagttgcca
gcgaacctgccgagtaatccggggtactataaggtgaatcctgcggactcgccgattatg
attctggcgctcacctcggacacgatgaatattccgcagttgtacgatgcgtgcgacagc
attcttgcgcagaagatcgcacagataccgggtgtgggacagaccttttgcggaggcagc
tcgaagccttcggtacgaatcgaagcgaatccgttgcaactggcacactacggcgtgggg
ttggaagcggtacgggcggcgatcggcacagtgaatgtgaatcagccgaaggggtatctg
caggacgacacgcggcggtggagtgttagtgcgacggatcagttatttggtgcggctgcg
tatgctccgttgattgttgcaacggacagggggccggtgagttcggctgcagcaagctca
gggctgcctgcttccgtggcaagcgcgttgacgagcaatccgcaggctgtgaatggggga
gcgggttcgacgactactaacaccgcgaccaccgccgcttcgataggtacgagcagtccg
gttgcggctccgacggcgagtgcgtcgacgggaatgacggcggggccggccactgcgcat
ggcatcgtccggatcgaggacgtcgcgaaggtagtggatagcgttgaggacgtccatggc
accggagtgttcaacggcaagcctgcaattctggtgattgtgttcaagacctcgacggcg
aatgtgatcgagaccgtggataacgtgaagaagatgctgccgctgctggaggcgtcgatt
ccgccggcgatttcggtgcatgttgcgttggaccgcacgactacgattcgcgcgtctgtg
aaggatgtgacgcggacgctggtgatctcgattttgctggtgatcctggtggtgtttctg
ttcctgcgtgaagtgcgttcgactttgattccgacggtcgcggtgcctttgagtctgctg
ggaacgttcgcggtgatgtatctgctgggatatacgctggacaatctttcgctgatggcg
ctgacgatctcgacggggtttgtagtcgatgacgcgattgtggtgatcgagaatatcagc
cgtcatcttgaagctggaatgtcaccgtaccaagccgcgatgttggggtcgaaggagatc
gggtttacggtggtgtcgatgagcacatcgctgattgcagtgttcattccgattctgctg
atgggtgggattgtggggaggttgtttcgcgagtttgctgtgacgctgtcggtggcgatt
atggtgtcgctggtggtgtcactgacgactacgccgatgttgagcgcgaagtttcttgag
gcgcacaacaggcggaagcatggatggttttatcgctcgggagagcgggcgctggagtgg
ctggctgcggagtatgagctgggacttcggtgggtgctgaagcatcagaagctggtgctg
acgattactgtgctgacgtttgtgctcaacgtctatctctacattctggtgccgaaggga
ttctttcctgagcaggacgcggggcgaattggcggacaggtgcagggccagcaggatgtt
tcgtttcctgagttgaagaagaaagtgctggcgctggcggcgattgcggggaaagatccg
ggagtgcaggatgtgacggcgtttgccggcgggcgcggaaacgtcaattctggctttatg
tttatggcgctgaagccggatgcggagcggaagaagacgggtgacacggcgcaggtgatc
gtggaccggctgcgaccgcagatgaccagcgttccgggcgcggttatgtatctgcaggca
tttcaggatctgaggatcggtgggcggaacacggcgacggagtatcagtacacgctgacg
gcagacaacctgaaggagttgaacgagtgggggccgaagctggaggctgcgatggaccag
ctacctcagatcaaagacgttgcgacggacgagcagcaggaggggttgcgcgggcagctc
gtgatcgaccgggctacggcgagccgtctgggagtttcgccgctgacgattgattcaacg
ctgtcggatgcgtttgcgcaggcgcaggtttcgacgacgtacatgccgctgaatcagtac
cacgtggtgttggaggttccgccggagtttcaggaagatcctgatgcgctgaagaatatc
tatgtgaagagtacgacgggagcgatggtgccgctgtcggcgatgactcactttgaaacg
cagagaattccactggcggtgaatcaccagtcgcagtcgccggctacgacgttgtcgttc
aatctggcgcccggggcttcgctgagtgaggcgacgcaggcgattcagcaggcgcgggtg
gatatcggaatgccttcggcgatccatggtgggtttgcgggatcggcgcaggctttcaag
gattcgctgaagagcgagccatggctgattttgctggcgctggtggcggtttatcttgtg
ctcgggattttgtatgagagctttattcatccgttgacgattctgtcgacgctgccttcg
gctggcgtgggtgcgattgtggcgctgctgctgttcaaggtggatctgagcgtgatcgcc
atgatcgggatcattctgctgatcgggattgtgaagaagaacgcgattatgatgatcgac
ttcgcgctgttggcggagcggcaacatgggaagacgccgcaggaagcgatctttgaggct
tgcatgctgcggtttcggccaatcatgatgacgaccatggcggcgatgctgggtgggctc
ccgctggcgctgggacgcggagctggaagtgagacgcggcgaccactgggaatcacgatt
gtgggcggtctgattgtgtcgcaggcgctgacgctgtttactacgccagtggtttatctg
ttctttgatcgggtgaggggcaggttcgcgcggatggggcggagacgacgggccgggcgg
cgtgtggcagaggttgtggtggctggagattaa
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