Tunturiibacter psychrotolerans: RBB77_03460
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Entry
RBB77_03460 CDS
T10213
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
tpsc Tunturiibacter psychrotolerans
Brite
KEGG Orthology (KO) [BR:
tpsc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpsc01002
]
RBB77_03460
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tpsc01011
]
RBB77_03460
Peptidases and inhibitors [BR:
tpsc01002
]
Cysteine peptidases
Family C82
RBB77_03460
Peptidoglycan biosynthesis and degradation proteins [BR:
tpsc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RBB77_03460
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
URO-D
Motif
Other DBs
NCBI-ProteinID:
XCB33962
UniProt:
A0AAU7ZSL9
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Position
886041..887804
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AA seq
587 aa
AA seq
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MIKVSLRSAGTMSALIVLLLVSGCHRHRKSKSQPNTTAYADKLHEMVEKKVLPPEKVDTT
KVPNLRWPNFSDYQTIVATFYDDRNYEVAWTRDGAPTASAKGFIQAFQDAASKGLIPEDY
DAPRWADRVQALNSKSDDAISLFDVAMTVNVMRYISDLRIGRVNPSRFNFEIPVQDKKYD
LAEFVSDNAVDATDVPKLIAGVEPDSDQYRQTEAALAHYMDLAKQQGEAHADPLPTVPKA
ISVGGSYAALPALLARLQLEGDAEAGATLSSPNTTTFDSSLSDAVKHYQHRHGFTEDGKL
TPQTIQSLNVPMDFRVAQLQDSLERWRWLPEPYLHARLMVNLPEFVLRGFDPDHKLDFTM
RVVVGKVMGQHETPVFTHMMKYLVFRPYWSVPVDIARKELVPHMEASHGYLASKNFEVTN
NKGILQTDYTAKQVAQGAVMVREKPGPKNSLGLVKFIFPNQYDIYLHSTPAVSLFDQTRR
DFSHGCIRVQKPADLAAWVLQGQGDWDLEKVQEAMNSGPDNKTVSLKTPLPIVIFYLTAI
VEDGAEVHFFDDIYGYDSEMQKVFSKGPPYPIKPQPIVPKTKEGDTV
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagtctctcttcgctccgccggtaccatgtctgcccttatcgttttgctgctt
gtgagcggatgccaccgccatcgcaagtccaagtctcagcccaatacgacggcgtacgcg
gacaagctgcatgagatggtcgagaaaaaagtactgccgcccgagaaggtcgataccacc
aaggtcccaaatctgcgttggcccaacttctccgactaccaaaccatcgtggctaccttc
tacgacgatcgtaactacgaggtggcatggacccgtgacggcgcaccaaccgcctccgcg
aagggctttattcaggcctttcaggacgccgcatcgaagggcctgattcctgaagactac
gacgccccacgctgggctgatcgcgttcaggcgctcaacagcaagtccgacgacgcgatc
tcgctcttcgacgtagccatgacggtgaacgtcatgcgttatatctccgatctgcgcatc
ggccgcgtcaatccgtcgcgtttcaacttcgagattcccgttcaagacaagaagtacgac
cttgcggagttcgtctctgacaacgccgtcgacgctaccgatgtgccgaaactcatagcc
ggcgtcgagcctgactctgatcagtaccgccagaccgaagccgcgctggcacactacatg
gatctcgccaagcagcagggcgaagcgcatgctgacccactgccaacagttccgaaggca
atctcggtgggtgggagttacgcggcgctgcctgctcttctcgcgagactccaactcgaa
ggcgatgcggaggccggcgccacactgtcttctccgaacacgacgacgttcgactcctcg
ttgtctgatgcggtaaagcactatcagcatcgccacggcttcaccgaagatggcaagctt
acgccgcagacgatccaatcgcttaacgtaccgatggactttcgcgtggcgcaattgcag
gattcgctcgaacgctggcgctggctccccgagccatacctgcatgcgcggttgatggtg
aatcttcctgagttcgtgctacgcggctttgatcccgatcacaagctcgacttcaccatg
cgcgttgtcgtaggcaaggtgatggggcagcacgaaacgcccgtattcacgcacatgatg
aagtaccttgtcttccggccttactggagtgttccggtcgacatcgcgcgcaaagaactg
gtgccgcacatggaggccagccacggctatcttgcgagcaagaacttcgaggtgaccaac
aacaagggcattctccaaaccgactacaccgccaaacaggtcgcacaaggtgctgtgatg
gtgcgcgagaagcctggcccgaagaactcactcggcctggttaaattcatcttccccaat
cagtacgacatctatctgcactccacgccggctgtctctcttttcgatcagactcgacgc
gacttcagccatggttgcatccgagtgcagaagcccgccgacctcgccgcgtgggtgttg
cagggacagggcgactgggatctcgaaaaggtgcaggaggcgatgaacagcggcccggac
aacaagaccgtcagcctcaaaactccactgccgatcgtgatcttctacttgacggctatc
gttgaggacggcgcagaggtccacttcttcgacgacatctacggctacgactccgagatg
cagaaggtcttctccaaaggcccaccctacccgatcaagccccagcccatcgtgccgaag
accaaggagggcgacacggtttag
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