Tunturiibacter psychrotolerans: RBB77_04080
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Entry
RBB77_04080 CDS
T10213
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tpsc Tunturiibacter psychrotolerans
Brite
KEGG Orthology (KO) [BR:
tpsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpsc03032
]
RBB77_04080
03400 DNA repair and recombination proteins [BR:
tpsc03400
]
RBB77_04080
Enzymes [BR:
tpsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RBB77_04080
DNA replication proteins [BR:
tpsc03032
]
Prokaryotic type
DNA Topoisomerases
RBB77_04080
DNA repair and recombination proteins [BR:
tpsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RBB77_04080
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
XCB34081
UniProt:
A0AAU7ZT55
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All DBs
Position
1041705..1042784
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AA seq
359 aa
AA seq
DB search
MPRKKRLEIVIDPAESAKAAGLRYVTDTKPGIQRKPWRKSFRYLDPSGVAVRDEETLGRI
KSLVIPPAWTEVWICPNPKGHLQVTGRDARGRKQSRYHPRWREVRDETKYERMMIFGAAL
PIIRERVEHDLSLPNLPRPKVLATIIRLMETTLIRVGNEEYARQNHSYGLTTMRNKHVEI
DGSTVTFNFQGKSGVKHTVDITDRRIAKIVQRCQDIPGYELFQYVDKDGTQHSIDSADVN
EYLREISGQDFTAKDFRTWAGSVLACEMLREFEAFDSETQAKRNVVQAIKSVAARLGNTP
SVCRKCYVHPAVLDSYISGAMLETVKRRVQDKGSQSPDLQHQEIALLNLLRRQVDLAVA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaaagaaacgcttagaaatagtcattgatcctgccgagtccgcaaaagccgcc
gggttgcgttatgtcaccgacacgaaacccggcatccaacgtaagccgtggcgcaagagc
tttcgctacctcgatccgagcggagtcgcagtccgcgacgaagagacactggggcggatc
aagtctcttgtcatccctccagcctggaccgaagtctggatctgtccaaaccctaagggc
caccttcaagtcacaggccgagatgcacgaggcagaaagcagagccgctatcatccgcgc
tggcgcgaggtgcgcgacgagaccaagtacgagcggatgatgatctttggcgcagctctg
ccgatcatccgcgagcgcgtcgagcatgatctctcgcttcccaatctgcctcgccccaaa
gtcctcgcaaccatcattcgcctcatggaaaccacactcatccgcgtcggcaacgaggag
tacgcacgtcaaaatcactcctacggactcacgacgatgcggaacaaacacgtcgagata
gacggttctaccgtaaccttcaacttccagggcaaaagcggagtcaaacatacagtcgac
atcaccgaccggcgcatcgccaagattgtgcaacgctgccaggacatccccggctacgag
ctcttccagtacgtcgacaaggatggcacccagcactcgatcgactccgccgacgtcaac
gaatacctccgcgagatctcaggacaggacttcaccgcaaaggactttcgcacctgggcc
ggatccgttctcgcctgcgagatgctgcgcgagttcgaagcattcgactccgagacgcag
gccaaacggaatgtagtgcaggcgataaaatcggtagccgcacgcctgggaaacaccccg
tcggtctgcagaaaatgctacgtgcaccctgccgttctcgactcatacataagcggcgcc
atgctcgaaacagttaaacgccgcgtgcaggacaagggttcgcaatcgcctgatttacaa
caccaagagatcgctcttctgaatctgctgcgccgccaagtggacttggcagtcgcctag
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