Tunturiibacter psychrotolerans: RBB77_06330
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Entry
RBB77_06330 CDS
T10213
Name
(GenBank) Ig-like domain repeat protein
Organism
tpsc Tunturiibacter psychrotolerans
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_3_5
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
XCB34501
UniProt:
A0AAU7ZUH9
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Position
1582996..1589505
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AA seq
2169 aa
AA seq
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MTRLSHRSPCFSVSTFMSLCRTRVFFFLILLSVVSPAAFGATPTPTATVTTLAISATSVA
YQTPIILTATVTAGNSPITAGLVLFCEATAKYCENNSALGIAQLTFPAATASLKIGSGPI
GNHSYKSVFRANNLYASSESNTVTYSVTGTYASSLTLTSAGSIGNYSLTGTVAGVGSLNT
GPSGTISFLDTSTSNSLLGSENLVVSTLSTTFVQNQPFAIGGNGTTLRSVAIASAYLNTD
NNLDVVTGDAAQTISVLLGNGDGTFQPKVNYAGCNVGKALQIVLADFNRDGVTDIALGCS
DGTNGGLVIILGSGDGTFKTPVYYPTGDVASIAIGDFNNDGLLDIALSNKSQENVTFFLG
DGTGKFVQEKVSISTTALAHGVVVADFNMDGKDDVAYAVDTATPNSSLSDLYLAFGNGDG
TFQIPTSPVASQIGEFLTAGDTNADDFPDVVSSSITRPGSGNSNIGNSLFVLLGNGKGAF
QTSTYVSDIPSDPHLADVNGDGIPDIIAGGSTGALVYQGNGDGTFQNYQEPGIGGFALTY
AVNAGDYNNDGNADLIGTDADTPRAAVSLSQVQQTSVASALTNVAVFPLGSGIHNVDASY
SGDSVYIGSISATVPLTAAPVNTTLTLTSSALSSIFPGQSVVLTAMLAPYTVGPPTTTTN
NELVTFFTGTTSLGSAKLVNGVATLTTTALPVGADALTAVYAGDSNYNPSNSNTVTATVS
NVLLSSSLNPSLYLQSVTFTGTVPKGNSGTIVFFDGSTNIGSGLISGTTATFTTSSLSVG
SHNITAHYNSNISAVLVQVVNRATPTVSVATSGPSIYGGSVTITATVPSGTTGTITITGG
GLTLGSGTVNPAGTVTITTTTLPVGNDPIIASYGGDTNNNPATGSTTQTVRTASPAETLS
SSINPSVTNQSVVFTSSLPSNATGTVTFTSGSTILGTSTLANGVATVSTSTLPIGADSIT
ATYNGDANNNTATATLTQTVNKATPAVIVTTSGPSTYGNPVTITTTVPPGTTGTITITSG
GTTLGSGTVNPTTGTVTITTTTLPVGNDPITASYGGDANDNPATGTTTQTVTKATPTVTL
TSSTNPSTANQSVTFTASLPSGVTGTVTFTSGVTVLGTTTLASGSATVSTSTLPTGNDPI
TATYNGDNNNNSASASLAQVVGKAKVTPTVTVTTSGPSIYGGSVTITATVPSGTTGTITI
TSGGATLGSGTVNPTTGTVAISTTILPVGNDPITASYGGDTNNNPTTGTTTQTVTKASPK
ETLSSSLNPSPANQSVVFTASLPSNATGTVTFISGSTALGTSTVANGVATVSTSTLPIGA
DPITATYNGDANDNTATANLTETVNKATPPVTVTTSGSSSFGNPVTITTTVPPGTTGTIT
VTSGGTTLGSGTINPTTGTVTITTTTLPVGSDPITASYGGDTNDNPATGTTTQTVTKATP
TVNLTSSVNPSALNQSVTFTATLPSGVTGTVTFTNGSTVLGTSTLTGGVATVASSTLPTG
SDTITATYNGDGNYNSAAATLVQSVGKTTPTVIVTTSGSSTFGNPVTITTTVPPGTTGTI
TITSGGTTLGSGTVNPTTGTVTITTTALPVGSDPITASYGGDTNNNPATGTTTQIVTKVT
PAVTLTSSANPSVANQSVTFTASLPSGVTGTVTFTNGATVLGSSTLTSGEATISTSTLPA
GNDPITATYNGDTNNNSSSANLTQIVGKVTPILPPPVVSSANLPVDTPETITEKVPVGVT
GTVTFSDGTTPLGTAPIVDGVATLTVPSLPLGVDSITAATSGDANDNPATSPPTLVTVGK
TASVVTLTSSTNPAAFNQLITLSASVHSGATGVVTFLDGSTILGTGALNAAGVATLSTST
LAIGSHPITASFGGDSNYSSSTSSVLAQVINKIPTVITITESTPAQLIKTGITFTANVTA
SSPNATGTVTFLDGTTVLGTASLTANGGVAVSLSTNANAALLTSNLAMGTHQIVAVYSGD
GTFAPSTSVPANDVVEDFTNTNSGPASQNVFPGASTSYNFSLAPISATTFLNNVTVTVTG
LPPGSTYTFSPSSVAAGSGTTAVVLNVQTSSSLSARNSPLRGTPSSKNELSVALGMLSIL
GLGTMRKLRKKIPRTLMLALLALGSLLPIAALSGCAGGYFTLTPTTYTVTVTGVEGTVQH
AATATLIVQ
NT seq
6510 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcttgtctcaccgttcgccttgtttttctgtctcgacttttatgagtctttgc
cgcacgcgagtattttttttcctcatcttgttatcagtcgtctcgcccgcggcctttgga
gcaacgcccaccccaactgcaaccgtcacaacgttggcaatctcggcgacttctgttgcc
taccagactccgatcattctgacggcaaccgtgacagcaggaaattcgccaatcacagct
gggctagtgcttttttgtgaagcgacggcaaagtattgcgaaaataactctgctctggga
atcgcccaattgacttttcctgcagctaccgcctccctcaaaatcggcagcggaccgatc
ggaaatcacagctataaatcggtgttcagggcgaacaacctctacgcaagcagcgaatca
aatacggtcacatattcagtgacaggtacgtatgcatcgtccttgactttgacctcagcg
ggatctatcggcaactatagtcttactggaactgtcgcaggtgttggctcgcttaacact
ggccccagcggcactatctcgtttctggacacgagcacgagcaatagtctgcttggctcc
gaaaatctcgtagtgtcgacgctctcgacgacatttgttcaaaaccagccattcgcaata
ggcggtaatggcacaacccttcggtcagtcgccatcgcatcggcttatcttaataccgac
aacaatctcgatgtggtcactggggatgccgcacaaacgatttccgtgcttctcggcaat
ggagatgggacctttcagccgaaggtgaactatgccggttgtaacgttggaaaagcgctc
cagattgtccttgccgatttcaaccgtgatggggtcaccgatattgcgcttggctgttcc
gacggcactaatggcggcctagttattatcctcggtagcggtgatggaaccttcaagacc
cctgtctactatcctaccggcgatgtcgcgagcattgccataggcgacttcaataacgac
ggtcttttggatatcgcgctctccaacaagtcacaagagaatgtcacattcttccttggc
gacggcacgggcaaatttgtccaggagaaggtatctatttcgactactgcccttgcccat
ggcgtagtagttgcggactttaacatggatggcaaggacgatgtcgcctacgctgtcgat
acagcgacgcccaacagttcgttgtcagatctctaccttgccttcggtaatggtgatgga
acatttcaaattccgacctctcccgtagcgagccagataggtgagttcctaaccgccggc
gatacaaacgccgatgactttccagatgttgtatcaagttccatcacacgaccgggtagt
ggtaacagtaatatcggaaacagcctcttcgtccttcttggaaacgggaagggagctttc
cagacatccacctacgtttccgatattccatcagatcctcatcttgccgacgtaaatgga
gacggaattcctgacattatcgcaggaggtagtaccggcgctctcgtctaccagggtaat
ggcgacggaaccttccaaaattaccaggagccaggcattggcggcttcgccctcacatat
gccgtcaatgccggagactataacaacgacggcaatgcagacctcattggaacagacgca
gataccccccgcgccgctgtttccttgagccaggttcaacaaacgtctgtcgcctctgcc
ctcactaatgtggctgtcttcccgcttggcagtggtattcacaatgtggatgcgagttac
tctggcgactccgtttatataggtagcatctccgccacagtgcctctcacagctgcacct
gtaaatacaacgctcactttgacgtcgtcggcactctcatcaatttttccgggtcaatct
gtagtgttgacagctatgctggccccctacaccgtcggaccacctaccacgaccaccaac
aatgagcttgtcacgttcttcacgggaacgacttctctggggtcagccaaactagtaaac
ggagtcgctacgctgacgacaactgccctgccagtaggtgccgacgcacttaccgccgtt
tacgctggagattctaactacaatcccagcaactcaaatacggttacagccacagtttct
aacgtcctgctaagctcttccctcaatccttcactttatttgcaatcggtcaccttcact
ggaaccgtacctaaaggaaactccgggacaatagtcttcttcgacggttcaactaacatt
ggaagcggacttatatctggaaccaccgcaacattcacgacgtctagtctttcggttggt
tcgcacaacatcaccgcgcactataactccaatatctcagctgttcttgtccaggttgtg
aatagggcgactccgaccgtaagcgttgccacctccggtccaagcatctacggtggttcg
gtcacaattactgcgacggttccttcgggcacaactggcaccattacgatcaccggcggg
ggattgactcttggctccggcaccgtgaatccggccggaacagtaactatcactacgaca
actcttccagttggaaatgatccaatcattgcttcctatggcggtgatacgaataacaat
ccggctacaggttcgacgacgcagacggtgaggacagcctctcctgctgagacgctgtcc
tcatcgatcaatccgtcggtcacaaatcagtcggtcgttttcacctcatctcttccatcg
aacgcaaccggaaccgtgacctttactagcggttcaaccatcttaggcacgtcaactttg
gcaaatggtgtggcaaccgtaagtacttccaccctgcctataggtgctgactcgatcact
gcaacctacaacggcgatgcaaataacaacacggcgacagcaactttaacccagaccgta
aataaggcgaccccggcggtcattgtcacgacctctggtccgagcacttatggaaacccc
gtcacgattacgacgacggtcccccctggcaccaccggcacgataacaattaccagcggc
ggaacgactctgggctccggcacggtgaatccgacgactggcactgtgaccatcaccacg
acgactctgcccgtcggcaacgacccaattacagcctcctatggaggtgatgccaacgac
aacccagccactggcaccaccactcagaccgtgacaaaggccaccccaactgtaactcta
acctcgtccactaacccgtcgacggcaaatcagtccgtgacctttaccgcctcgcttccc
tctggcgtaacgggcacggtgactttcacaagcggtgtaactgtcctcgggacaacaaca
cttgccagcggctcagcaaccgtgtccacttctaccctgccaacaggaaacgaccccatc
accgctacctacaacggggataacaataacaactccgcatccgctagtcttgcccaggtg
gttggcaaggccaaggtaactccgactgtgactgtcacgacctccggcccgagcatttac
gggggctcggtcacaattacggcgacggttccttcgggcacaaccggcactataacaatc
accagtggcggcgcgactctgggctctggcacggtgaacccaacaaccggaacagtagca
atttctacaaccattcttccagtaggcaacgacccgattactgcctcctatgggggcgac
acaaacaacaatcccaccactggcacaaccacacagactgtgaccaaggcctctccaaaa
gagaccttgtcttcgtcgctcaatccctcccctgccaaccagtcagtcgtcttcaccgca
tctcttccatcgaacgctaccggtaccgtgaccttcatcagcggttcaacagctctgggc
acgtcaactgtggccaatggtgtagcgactgtaagcacttccacgctgcctataggtgct
gacccgatcactgcgacctacaatggtgatgcgaatgacaacacggcaacagcaaatctg
accgagacagttaacaaagctaccccaccggttactgtcaccacttccggttcgagcagc
ttcggcaaccccgttaccattacgactactgtacctcccggcacaaccggcacgatcacg
gtcaccagtggcgggacgacgcttggctccggcacgataaacccgacgacaggcaccgta
acaatcacaacgacaacactcccggtgggcagtgatccaatcaccgcttcctacggtggc
gatacaaacgacaatccggctaccggcacaaccacccagactgtgacaaaagcaactccc
acggtgaacctgacttcttcggtcaacccgtctgcattgaatcaatctgtaacctttacg
gctacgcttccgtccggcgtcaccggaactgtaacctttaccaatggttcgacggttctg
ggcacctcgacgctgaccggcggagttgcaactgtggccagttctacactcccaacagga
agcgataccatcaccgccacctacaatggagatgggaactacaacagcgcggcggcgact
ctcgtccaatcggtcggtaagacgactccgacggtcatcgtcaccacctccggttcgagc
acctttggcaaccccgtcacgattacaacgacggttccccctggcaccactggcaccata
acaattaccagtggcggaacgactctaggttccggcacagtgaatccgacgaccggcacc
gtaaccatcaccacgacggctctgcccgtcggcagcgacccgattactgcctcctacgga
ggtgataccaacaacaatccggccacgggcactaccacccagatcgtgactaaggtcacc
ccggctgtaactctaacctcttcggctaatccgtcggtggcgaaccagtccgtgaccttt
accgcctcgcttccctctggtgtaaccggcactgtgactttcaccaacggtgcgactgtc
cttgggtcctcgacgctgaccagtggagaagcaactatctccacttccaccctgccagca
ggaaacgaccccatcaccgccacctacaacggagatactaataacaactcctcttccgcc
aatctcacccagatagtaggtaaggtaactccgatcctacctccgcccgtcgtctcgtcc
gctaaccttcccgtcgatacgccggagaccatcaccgaaaaagtcccagtaggtgttact
ggcacagtgaccttttccgatggcacgacaccgctaggcaccgcgcctatcgtggatggg
gtcgcaactcttactgttccgtcgctaccgcttggagttgattccatcacagcggccacc
tcgggagacgcgaacgacaatccagctacgtcgccgcctactctggttacagtcggcaaa
acggcatccgtggtgactctaacctcgtcgaccaatcccgcggcattcaatcagctcata
actttatcagcctccgtacactccggagccacgggcgtggtgacttttcttgacggttca
accattctgggaacgggagcgctaaatgccgcgggagtcgcaacactttccacatcgacg
ctagcgatcggatctcatccaattacagcttcttttggtggcgattcgaactacagctct
tcgacatcttcagtactggcacaggtcatcaataagatcccgactgttatcacgattact
gaaagcacacctgcccaactgatcaagactggaatcaccttcacggccaacgttaccgct
tcgagtcctaatgcaacaggaacggtgacctttttggatggtacaaccgtattgggaacg
gcttctctcaccgcaaatggtggcgttgcggtgtcgctcagcacgaatgcgaatgcggct
ctgctcacctcaaacctggcaatgggaacacatcagatcgtagcggtctattcaggggac
ggcacctttgctcccagcacgtcagttcccgctaacgacgttgtggaagatttcacaaac
acaaatagtggtcccgctagccagaatgtttttccaggcgcgtcaacaagctataacttt
agtctcgctcccataagcgcgacaaccttcctcaataatgtgacggtcacggtcacaggc
ttgccaccaggttcaacctatacttttagtccatcttccgttgctgctggtagcgggacc
acggcagtcgttctgaacgtgcaaaccagcagttctctcagcgcgcgaaattccccattg
cgaggcactccttcttcaaagaacgaactgtcggtcgctctcggaatgcttagcattcta
ggcctcgggacaatgaggaagctgcgaaagaagatccctcgtactctgatgctagccctc
ttggctctcggatctcttctgccaatcgctgcactgagtgggtgcgcaggcgggtatttc
actcttaccccgacgacctacaccgtcacggtgaccggcgtcgaaggtaccgtccaacat
gcggcaaccgctaccttgattgttcagtag
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