Tunturiibacter psychrotolerans: RBB77_07315
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Entry
RBB77_07315 CDS
T10213
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tpsc Tunturiibacter psychrotolerans
Pathway
tpsc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpsc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RBB77_07315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpsc03021
]
RBB77_07315
03400 DNA repair and recombination proteins [BR:
tpsc03400
]
RBB77_07315
Enzymes [BR:
tpsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RBB77_07315
Transcription machinery [BR:
tpsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RBB77_07315
DNA repair and recombination proteins [BR:
tpsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RBB77_07315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
XCB34695
UniProt:
A0AAU7ZUX2
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All DBs
Position
1814550..1815653
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AA seq
367 aa
AA seq
DB search
MLWRGFQKPKRLAVDTETLTEKYGKFSAQPFERGFGTTIGNALRRTLLSSIEGAAVTAVR
IEGVLHEFQSITGVVEDATDIILNLKQIPFKLAGEGPKALYLRADQAGVITSGMIEADGD
VEILDKNVYICTVSEGGKIDMEMRLKRGRGYISADKNFDGDLGLGFIPVDSVHSPVRKVN
YLVEAARLGQITDYDKLTIEIWTNGTILPADALGLSAKLLKDHMTIFINFEEEMEAGHDG
LHDGPAMRNENLNRSVEELELSVRSYNCLKNANIATIGELIQKTEAEMLKTKNFGRKSLN
EIKEILAQMGLSLGMKIDENGNPQPGPTSVLPAATLAASFGNFDDDDDEDEDEDEDLDLV
GSEPENF
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgctttggagaggttttcaaaagcccaagcgcctcgcagtcgacaccgaaactctaacc
gaaaagtacggcaagttctccgcgcagccctttgagcgcggcttcggtaccaccattggc
aacgcacttcgccgcaccctactctcctcgatcgagggagctgccgtgaccgccgttcgc
atcgaaggtgtcctgcacgagttccagtccattacgggcgttgttgaagatgcaacagac
atcatcctgaacctcaagcagattccgttcaagcttgctggcgaaggccccaaggctctc
tacctccgcgctgaccaggccggcgtcatcacgtccggcatgatcgaagctgatggggac
gtcgaaatcctcgacaagaacgtctacatttgcaccgtctctgaaggcggcaagatcgat
atggagatgcgcctgaagcgcggccgtggctacatctcggctgacaagaacttcgacggc
gacctcggcctcggcttcattccggtcgactccgtccactcgcccgtccgcaaggtcaac
tatctcgtcgaggcagctcgtctcggtcagatcaccgactacgacaagctcaccatcgag
atctggaccaacggcaccattcttcccgccgatgcacttggcctttccgcgaagctgctg
aaggaccacatgaccatcttcatcaactttgaagaggagatggaagccggccacgacggt
ctgcacgacggcccggcaatgcgcaacgagaacctcaaccgctcggtcgaagagcttgag
ctctccgtccgaagctacaactgcctcaagaacgccaacatcgccacaatcggcgagctc
attcagaagaccgaagccgagatgttgaagaccaagaacttcggccgcaagtccctgaac
gagatcaaagagatcctcgcgcagatgggcctgtccctcggcatgaagatcgacgagaac
ggcaacccgcagcccggacctacctccgtcctgcccgcagccaccctcgccgccagcttc
ggcaactttgatgacgatgatgacgaagacgaagatgaggacgaagacctcgacctcgtc
ggcagcgaaccagagaacttctag
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