Tunturiibacter psychrotolerans: RBB77_08025
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Entry
RBB77_08025 CDS
T10213
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tpsc Tunturiibacter psychrotolerans
Pathway
tpsc00300
Lysine biosynthesis
tpsc00470
D-Amino acid metabolism
tpsc01100
Metabolic pathways
tpsc01110
Biosynthesis of secondary metabolites
tpsc01120
Microbial metabolism in diverse environments
tpsc01230
Biosynthesis of amino acids
Module
tpsc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tpsc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RBB77_08025 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RBB77_08025 (dapF)
Enzymes [BR:
tpsc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RBB77_08025 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
XCB34831
UniProt:
A0AAU7ZVG5
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All DBs
Position
1972805..1973608
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AA seq
267 aa
AA seq
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MIPFVKAHACGNDFLIIEEPLAQRRHAELARKLCARNTSIGADGIEFLERKPNGEFFLRL
FNADGSEAELSGNGTRCVAAWLASSEGRREVALGTHGGLRTCHVIEANDPLYLIESEMGI
PRVMQRTIVLPGVGEVPGAMVNVGNPHFVLFVECDDFSAHGLSWQELGAQISVSPLFPHG
TNVEFVRVLSPSEIAFRIFERGCGPTTSSGTGTCASSVAAMALRGADRALTAVAEGGPQR
TVWPTSDAVMRLTGPAEIICRGEVTAL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgattcccttcgtcaaagcgcacgcctgcggcaatgattttctgatcatcgaggagcca
ttggcgcaacgtcgtcatgccgaactcgcacgcaagctttgtgcacggaacactagtatt
ggagcggatggtattgaatttctggagcgaaagccgaacggtgagttttttctgcggctc
ttcaatgcagatggtagcgaggcagagctgtcgggaaacggcacgcggtgcgtggcggcg
tggctggccagcagcgaagggcgaagggaagtggcgctggggactcatggcgggcttcgt
acttgtcatgtaattgaggcgaacgatccgctgtacctgattgagagcgagatgggtata
ccgcgtgtgatgcagcgcacgattgtgctaccgggcgttggcgaggttcccggtgcgatg
gttaatgttggcaacccccatttcgttctctttgtggagtgtgatgacttcagtgcgcat
gggttgagctggcaggaacttggggcgcagatcagcgtgagccccctgtttcctcatgga
accaacgttgagttcgttcgtgttctgtcgccgtctgagattgcgtttcgtatctttgaa
cggggatgcggacctactacctcgtccggcacggggacgtgtgcttcgtctgtggcggct
atggcattgcgtggggcggatcgtgcattgactgcagttgctgaaggcggaccgcagcgt
acagtgtggcctacgagcgatgctgtgatgcggttgacggggccggcggagataatctgc
cgaggcgaggtcactgcactgtga
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