Tunturiibacter psychrotolerans: RBB77_13020
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Entry
RBB77_13020 CDS
T10213
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
tpsc Tunturiibacter psychrotolerans
Pathway
tpsc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RBB77_13020 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpsc03400
]
RBB77_13020 (uvrB)
DNA repair and recombination proteins [BR:
tpsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBB77_13020 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RBB77_13020 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
Kinesin
SWI2_SNF2
AAA_22
AAA_16
Microtub_bd
PMT2_N
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
XCB31379
UniProt:
A0AAU7ZJN0
LinkDB
All DBs
Position
complement(3194772..3196760)
Genome browser
AA seq
662 aa
AA seq
DB search
MDFQLSTTYKPQGDQPRAIAELISGIHAGEKDQVLLGVTGSGKTFTMAKVIEELQRPALI
LAHNKTLAAQLYHEFKTFFPNNAVEYFVSYYDYYQPEAYIPAGDLFIEKESTINEELDKL
RLAATRSLFERRDAIIVSSVSCIYGLGSPEAYYGMLMLLEKGQKIKREDITRRLVEILYD
RNDVDFRRGTFRVRGDIIEVYPTYDENAYRIELFGDEIDSLSQIDPLFGTVKQKYSRLPI
YPKSHYVVQPERKTTAIASILEEMEWWEKELENQGRLVESQRIHQRTRFDLEMIKSVGFC
HGIENYSRHFSARLPGEPPPTLLDYFPQDYLLFIDESHVTVPQLHGMWHGDRSRKQNLVD
YGFRLPSAMDNRPLRFEEFESRTGQIIYVSATPGAYELTKSAGVVVEQIIRPTGLIDPQV
EIRPIKGQIDDLLAEIRDRTQKNQRVLVTTLTKRMSEDLASYYTEVGVRCRYMHSEIETL
ERIKLLRDLRKGEYDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSQGSLIQTIGRAA
RHIEGRAILYADKMTDSMQRAINETDRRREKQVAYNEENGITPASIIRPIEMGLAGILKA
DYADLTDEAEGMPDFSTQQELDVYIGKLESDMREAAKKFEFEKAAKLRDTVKELRTKEFL
FS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggactttcagctctcgaccacctacaagccccagggcgaccagccccgcgccatcgcc
gagctcatctccggcattcacgccggcgaaaaagatcaagtcctcctcggcgtcaccggc
tccggcaaaaccttcaccatggctaaggtcatcgaagagctgcaacgccccgccctcatc
ctcgctcacaataaaaccctcgccgcccagctctaccacgagttcaaaaccttcttcccc
aacaacgccgtcgaatacttcgtctcctactacgactactaccaacccgaagcctacatc
cccgccggcgatctcttcattgaaaaggaatcaaccatcaatgaagagttggataaactt
cgtctcgccgccacccgcagcctcttcgagcgccgcgacgccatcatcgtctcctctgtc
tcctgcatctacggcctcggctcgcccgaagcctactacggcatgctgatgctcctcgaa
aaaggccagaagataaagcgcgaagacatcacccgccgactcgtcgagatcctctacgac
cgcaacgacgtcgacttccgtcgcggcaccttccgcgtccgcggcgacatcatcgaggtc
taccccacctacgacgagaacgcctaccgtatagagctcttcggcgacgaaatcgattca
ctctcccaaatcgacccgctcttcggcaccgtcaaacaaaaatactcacgcctccccatc
tatcccaagtcccactacgtcgtccaacccgagcgcaaaaccaccgccatcgcctccatc
ctcgaagagatggagtggtgggaaaaagaattggaaaatcaaggccgcctcgtcgaatcc
caacgcatccaccagcgcacccgcttcgacctcgagatgatcaaatccgtaggcttctgc
cacggcatcgaaaactactctcgccacttctccgcgcgtctccccggcgagcccccaccc
acgctcctcgactacttcccgcaggactatctcctcttcatcgacgagtcccacgtcacc
gtccctcaactccacggcatgtggcacggcgatcgcagccgcaagcaaaacctagtcgac
tacggcttccgccttcccagcgcgatggacaaccgccccctccgcttcgaagagttcgaa
tcccgcaccggccagatcatctacgtctccgcaacccccggtgcctacgagctgacaaaa
tccgccggtgtagtcgtcgagcaaatcatccgccccaccggcctcatcgatcctcaggta
gaaatccgcccaatcaaaggccagatcgacgacctcctcgccgagatccgcgaccgcacg
caaaaaaatcaacgcgtcctcgtcaccaccctcaccaagcgcatgtccgaagacctcgcc
agctactacaccgaagtcggcgtccgctgccgctacatgcactccgagatcgaaaccctc
gaacgcatcaagctcctgcgcgacctccgcaaaggcgagtacgacgtcctcatcggcatc
aacctcctccgcgaaggcctcgacctccccgaagtctcactcgtagccatcctcgacgcc
gacaaagaaggcttcctccgctcgcaaggctctctcatccaaaccatcggccgagccgcc
cgccacatcgaaggccgcgccatcctctacgccgacaagatgaccgactccatgcagcgc
gccatcaacgagaccgaccgccgtcgcgaaaaacaagtcgcctacaacgaagaaaacggc
atcactcccgcaagcatcattcgcccaatagaaatgggcctggccggcatcctcaaagcc
gactacgccgacctcaccgacgaagccgaaggcatgcccgacttctccacgcaacaagaa
ctagacgtctacatcggcaaactagaatccgacatgcgcgaagccgccaaaaaattcgaa
ttcgaaaaagccgccaagctccgcgacacagtaaaagaactccgcaccaaagaattcctc
ttcagctga
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