Tunturiibacter psychrotolerans: RBB77_15525
Help
Entry
RBB77_15525 CDS
T10213
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
tpsc Tunturiibacter psychrotolerans
Pathway
tpsc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tpsc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RBB77_15525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpsc03000
]
RBB77_15525
Transcription factors [BR:
tpsc03000
]
Prokaryotic type
Helix-turn-helix
Other families
RBB77_15525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FHA
Yop-YscD_cpl
GAF_3
GAF
AAA_5
AAA_16
GAF_2
Mg_chelatase
AAA_2
AAA
HTH_8
AAA_7
bpMoxR
LIS_MGM1
AAA_3
MCM
TIP49
CCDC14
AbiEi_4
NB-ARC
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
XCB31850
UniProt:
A0AAU7ZMR1
LinkDB
All DBs
Position
3792881..3794743
Genome browser
AA seq
620 aa
AA seq
DB search
MKPRLLAISGSLTGIIRELIDSPISVGRLEANQLCLADPAVSRRHCTIEKIGKLNGHYEL
VDLDSRSGTFVNGMPILRRSLEHGDTIRIGNTDFVFLMHESEITDSPRRRATDFSPNSPL
ETTRIAPPAGLPSFGVEVGRMARDLTALFRISNIINSIRDSQLLQRELLQLIFEVVPADE
GAVVLLTDFEEDTLEICRWSRQSDAISETEIQRELVHRAFWERTAVQIDADPDSGNPQNI
LCLPLVAIERTIGVLYLTSQHPAPPFREDHIYFLDSASRIAAVTLENILALDALRSENSQ
LKQQLNPASNLVGESRQIRQVSEFIARVAQSDSTVLIRGESGTGKEVIARSIHHSSPRSE
RPFIAINCAAIPEALLESELFGHEKGAYTGAIGMRKGKLEAAEDGTLFLDEIGELAPAMQ
AKLLRVLQQREFERVGGTRPVAFPARVLAATNKNLEQAIKANEFRQDLYYRLNVVSIAVP
SLREHSEDIPLLALYFASKYAQKNKRPFKGISSEARSLLMGYSWPGNVRELENAIEHAIV
LGLTEEILAEDLPTIILEEQSAKLVGARYHDVLNQSKKDLLATALRDAKGSYPEAARTLG
IHPKYLHRLARNLNLKSDPL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgcggctcctcgccatctcgggttcgctgaccggaatcattcgagagctgatc
gacagcccaatctctgttggcagactcgaagcaaaccaactctgcctcgccgatccggcg
gtctctcggagacattgcaccattgaaaaaatcgggaaactgaacgggcactatgagttg
gtcgacctcgacagcagaagcggcaccttcgtcaacggaatgcctatcctgcgccgatcc
ctcgagcatggtgacaccatccgcatcggcaacaccgacttcgtcttcctcatgcacgaa
agcgaaatcacagatagcccaagaagacgcgcaaccgacttttctcccaactctccgttg
gagaccacacgaatcgcgccaccagcgggccttccatccttcggagttgaagtcggacgc
atggcacgcgatctcaccgcactcttcagaatcagcaacatcatcaactccatccgagac
tctcaactcctccaacgcgaacttctgcaactcatctttgaagtagtcccagccgacgaa
ggagccgtcgttctcctcaccgactttgaagaagacacactcgaaatatgtcgctggagc
cggcaatccgacgcgatttcagaaaccgaaatccaacgcgaactcgttcatcgtgccttc
tgggagcgcaccgccgtccagatcgacgccgatccggactccggcaatccgcagaacatc
ctctgccttcccctcgtcgcgatagaacgaaccatcggcgtcctctatctcacctcgcaa
catcccgccccgccgtttcgcgaagatcacatctactttctcgactcggcctcccgtatc
gcagccgtcacactcgaaaacatcctcgctctcgatgcactgcgctcagaaaactcccaa
ctaaaacaacaactgaatcccgccagcaacctcgtaggcgaaagtcgacagattcgtcag
gtcagcgagttcatcgcgcgtgtcgcacaaagcgattccaccgtcctcattcgtggcgag
agcggtaccggcaaggaggtcatcgcacgttccatccatcacagcagtccaagaagcgaa
cgtcccttcatcgccatcaactgcgccgccatccccgaagccctcctcgaaagcgagctc
tttggccacgaaaaaggtgcatacaccggagccatcggcatgaggaaaggaaaactcgag
gccgccgaagacggaaccctcttcctcgacgagataggcgaactcgctcccgccatgcag
gccaaactcctccgagtcctccagcaaagagagttcgagcgcgtaggaggaactcgcccc
gtcgccttcccggctcgcgtcctcgccgccaccaacaaaaatctcgaacaagccatcaag
gcgaacgagttccgccaggatctctactaccgcctcaacgtagtttcaatcgcggtgcca
tccctgcgagagcacagcgaagacattcctctcctcgccctctacttcgcttcaaagtac
gcccagaaaaacaagcgtcccttcaaaggaatctcctccgaagcccgttccctgctgatg
ggttacagctggccgggaaacgtccgcgaactcgaaaatgcaatcgagcacgccatcgtc
ctcggcctcaccgaagagatcctcgccgaagacctccccaccatcatcctcgaagagcaa
tccgcaaaactggtaggagcgagataccacgacgtcctaaaccagtccaagaaagatctc
ctcgccaccgccctccgcgacgcaaaaggcagttatccggaagccgcgcgcaccctcggc
attcatcccaaatacctccatcgcctcgcacgaaacctcaacttaaaatccgatcccctc
taa
DBGET
integrated database retrieval system
