Tunturiibacter psychrotolerans: RBB77_17020
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Entry
RBB77_17020 CDS
T10213
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tpsc Tunturiibacter psychrotolerans
Brite
KEGG Orthology (KO) [BR:
tpsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpsc03016
]
RBB77_17020
Enzymes [BR:
tpsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
RBB77_17020
Transfer RNA biogenesis [BR:
tpsc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RBB77_17020
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
S1
T2SSF
Motif
Other DBs
NCBI-ProteinID:
XCB32133
UniProt:
A0AAU7ZMG4
LinkDB
All DBs
Position
complement(4106784..4108244)
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AA seq
486 aa
AA seq
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MSTLTFDLVAAAAAEMVREGFHTEFPDGSEAQVAAIRAAEGAKPDAEVRDLRGLLWSSID
NDTSRDLDQIEVAESVGDGVRVRVGVADVSGSVGKDTPLDRHAADQTQTVYTAVRNFSML
PTELSTDLTSLNEEEDRAAMVVEFVVDVEGKVQATSIYKAEVRNRAQLAYSHVGPWLEGK
AGPDAKVAASTELQGQLRLQDEAAVKLRAQRVKMGALEFNRVEADPVVVDGKVQSIGTAF
HNRASDLIEELMIAANETMARTLRAAKRSSIRRVVKSPERWARIVELVGRYGTVLPAQPD
SGALNAFLQAQRQVDAVHYPDLSLAIIKLMGPGEYVLARGDEEEQQGHFGLAAQDYSHST
APNRRFVDLVTQRVVKAMLSGEAAPYSDEELETIAKHCNERESAARKVERAMLKRVAAVA
LAGSVGKSFHGVITGANDKGTYVRVFDPPVEGKVVRGEQGLDVGDTVEVTLLHTDPQHAF
IDFAHG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtctacccttacttttgacctggttgctgccgccgctgctgagatggttcgcgaaggc
tttcatacggagtttcctgacggcagcgaggcgcaggtggcggcgattcgcgcggctgag
ggagcgaagcctgatgcggaggtacgtgatctgcgcgggttgctgtggtcttcgatcgat
aacgatacatcgcgggatctggatcagatcgaagtggctgagagtgtgggcgatggcgta
cgcgtgagggtgggagtcgcggatgtgtcgggatcggtggggaaggatactccgctcgat
cggcatgctgcggaccagacgcagacggtgtacacagcagtgagaaacttttcgatgctg
ccgacggagctttcgacggatttgacttcgttgaatgaagaggaagaccgggcggcgatg
gtggttgagtttgtggttgatgttgagggaaaggtgcaggcaacgagcatctacaaggca
gaggtgcggaacagggcacagcttgcgtacagccatgtggggccatggctggaagggaag
gcggggccggatgcgaaggtggctgcttctacggagttgcaggggcagctgcgactgcag
gatgaggcggcggtgaagctgcgggcgcagcgggtgaagatgggggcgctggagttcaac
cgtgtggaggctgatccggtggtggtggatgggaaggtgcagtcgatcggtacggcgttt
cataaccgggcgagcgatttgattgaagagttgatgattgctgcgaatgagacaatggcc
cggacgctgcgggcggcgaagcggtcgtcaattcgcagggtggtgaagtcgccggagcga
tgggcacggattgtggagttggtcgggcggtatgggactgtgctgccggctcagcctgac
tctggtgcgctgaatgcgtttttgcaggcgcagcgtcaggtggatgcggtgcattatccg
gacctgtcgctggccattattaagctgatggggccgggcgagtatgtgctggctcggggc
gatgaggaagagcagcagggacacttcggactggcggcgcaggattattcgcactcgacg
gcgccgaaccggcggtttgttgatttagtgacgcaacgggtggtgaaggcgatgttgagt
ggggaggctgctccctatagtgacgaggagcttgagacgattgcgaagcattgcaacgaa
cgagaatctgctgcgcgcaaggtggagcgggcgatgttgaagcgagtggccgcggtggcg
ctggcggggagcgtggggaagagcttccatggcgtgatcaccggggcgaatgataagggg
acctatgtgcgggtgttcgatccgccggtggaggggaaggtggtgcggggagagcagggg
ctagatgtgggggatacggtcgaggtgacgctgctgcataccgacccgcaacatgcgttt
atcgactttgcgcatgggtga
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