Tunturiibacter psychrotolerans: RBB77_17305
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Entry
RBB77_17305 CDS
T10213
Name
(GenBank) HU family DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
tpsc Tunturiibacter psychrotolerans
Brite
KEGG Orthology (KO) [BR:
tpsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpsc03032
]
RBB77_17305
03036 Chromosome and associated proteins [BR:
tpsc03036
]
RBB77_17305
03400 DNA repair and recombination proteins [BR:
tpsc03400
]
RBB77_17305
DNA replication proteins [BR:
tpsc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RBB77_17305
Chromosome and associated proteins [BR:
tpsc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
RBB77_17305
DNA repair and recombination proteins [BR:
tpsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
RBB77_17305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
XCB32185
UniProt:
A0AAU7ZMC9
LinkDB
All DBs
Position
4186089..4186445
Genome browser
AA seq
118 aa
AA seq
DB search
MTKADLVDKVTALGDLTRRDGEVIVDTLFDAVIGALKTGDKIEIRGFGSFRTRQRNARTG
RNPKTGAKVDVPAKRVPFFKPSKELRDSVNPNGAIKSKPVASKKVDKEHIDPHHPPAM
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagccgaccttgttgataaagtgaccgctcttggagacctgacccgccgtgat
ggggaggttattgtcgatacgctcttcgatgccgtcatcggcgcgctgaagaccggagac
aagatcgagattcgcggcttcggtagcttccgaacccgccagcgcaatgcccgaacgggc
cgcaatccgaagactggtgccaaggtcgatgttccggccaagcgggttcccttcttcaag
ccatcgaaggaactgcgcgattcggtaaacccgaacggcgccataaaatccaagcccgtg
gcctcgaaaaaggttgataaagaacacatcgatccacaccatccgcctgcgatgtaa
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